Detailed information of alor_g16890.t1 in Acropora loripes

Genomic Location: Acropora_loripes_143:870741...884561
NR annotation: XP_029212990.2, CCR4-NOT transcription complex subunit 3-like isoform X4 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K0V4CCR4-NOT transcription complex subunit 3 OS=Mus musculus OX=10090 GN=Cnot3 PE=1 SV=1
O75175CCR4-NOT transcription complex subunit 3 OS=Homo sapiens OX=9606 GN=CNOT3 PE=1 SV=1
O13870General negative regulator of transcription subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=not3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04065Not3Not1 N-terminal domain, CCR4-Not complex component FamilyInterproscan
PF04153NOT2_3_5_CNOT2/NOT3/NOT5 C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007207DomainCCR4-Not complex component, Not N-terminal domainInterproscan
IPR012270FamilyCCR4-NOT complex, subunit 3/ 5Interproscan
IPR040168FamilyNot2/Not3/Not5Interproscan
IPR038635Homologous_superfamilyCCR4-NOT complex subunit 2/3/5, C-terminal domain superfamilyInterproscan
IPR007282DomainNOT2/NOT3/NOT5, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23326CCR4 NOT-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0030015Cellular ComponentCCR4-NOT core complexInterproscan
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12580CNOT3, NOT3; CCR4-NOT transcription complex subunit 3-Messenger RNA biogenesisko03019deepkoala

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