Gene detail

Detailed information of alor_g17918.t1 in Acropora loripes

Genomic Location: Acropora_loripes_116:483620...485539
NR annotation: XP_029206619.2, tigger transposable element-derived protein 6-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8IY51	Tigger transposable element-derived protein 4 OS=Homo sapiens OX=9606 GN=TIGD4 PE=1 SV=2
O75564	Jerky protein homolog OS=Homo sapiens OX=9606 GN=JRK PE=1 SV=3
P32896	Protein PDC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDC2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19303	TRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan