Gene detail

Detailed information of alor_g18258.t2 in Acropora loripes

Genomic Location: Acropora_loripes_52:2350269...2361712
NR annotation: XP_044164675.1, uncharacterized protein LOC114977286 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

alor_g18258.t2

ATGGCTCCTACACTCGCCTTTACACTTGCCAAGACTCCCGCTTTACCTCTGTGCGGATTGTTTTCTTCTGTTGCGGTTTCGTTTGGCATTTCCTATGGGATTTACGTGGTTAAGTCAGGCCTGTTACTGGATATAGAAGGGAGAGCTTCAGGTGCGGTAAATGCTATAGCTGTTGATGTGAGTTTAGACGCCCAATTAAAGAAACTCACAGCTAAATGCTCAGATTTGTCAGACATATCCATCAAGTATTACTCCACAGATTTGCCATCCAAAGTTCCAACAGATCTGGAGGAGCTTGTGGAACTGATCAAGGGCTTTCCTTCGAGGTTGGAGAAAATCAACGAAGGCAAGGGGATTCCCCTGCAGTTTGAACTACAACCGATAAGTTACGCCCTCCAAAAAGAGGGGCCATCAGTTTCAAATATACCTCCTTTCAAGGAGGATCAACTGGAACAATACTATGACGATCTTCGCGCGGCCCAAACTCGAATTAACCTGTACCAGAAAAGCAACTTGGACGAAGACGAAGAAGTGTCGAGCTTTAGCGACGAAATCGAGGAAGTCATGGAGAAATTCATGGAAGCTATCACCTTGATGGGATCAAGTGGAGGCTCGGATGAAATGATTAAATCCTGTTTTGACGCTTACCACAAAGCTTTAGGTGGACGCAAAAGAGCTGGGAAATTCTGTAGAAAATGGGAGCAGATTTTATCAAAGAAGCTCCCTGGGGGAGATCCTCTGACTGTTGTTCTTATCGGAAAAACGGGGAATGGAAAGAGTTCTACTGGGAATCAAATACTTGGCCGTAAGCTCTTTGGAGTCAGCGACGGTGCCACGTCTGAAACGGCGTCATGTGACAAACAAACTAGAACGGACGAGAGGGAAATAACAGTGATTGATACTCCTGGCGTTATTGATACAAAAGTTGTCAAACAGATGACGAGTAAGACGAACCAGGCAAAGTACGCAGTAGGATTTATGAAGGAAATAGAGACAACTTTAAGAGAACTGGCAAAAATGTTCCTTTATGCTCCTCGTGGTTTCAATGCAATCCTGCTTCTTGCGAAGTTTGGCTCTCGATTTACTCGAGACGATAGTGACGCATTGCAAATGCTGTTGAAATTCTTGACAGCAGACGCCAAGAAATACATGATACTGGTATTGACCCATGGAGACGAGGCTGAATATAATGCAAGCGAGGAAGGCATCGCCGTTGAGGAATACTTGGAAAATTGGATAGACAGAATGGATGATTGGCTGAAAACGTTTATTCATGATGGTCTAAAGGACCGAGTGGTTTTGTTCAACTGCAGGTTGAAGCCAGATAGAGAACCCGAGGCTTACAAGAAACAGCTATGCAAATTAATCGAGATGATAGACAAAATTAAGGAAGAACAGAAAGATCCTTTCAAAACAGAATTTACGGACGACAGGTTTACGGACGCGGCGGGTTTGGTCGCACCGGAAAGCTTGGAAACTCTGAAAGAAAAACTGGAAAGCTATAACAGAAGACTTAGCGGAAAAGGTATCACGGAGAGTGAGAGACAAGATATTGAAAAGCGCAAAAAAGAAGTGGAAGAAAAAATTGAAGTGTTTGAAACGAAACTGGGTCATGTCAAAAATAAGATAAAAAGGTTAATTGGAGGTTGTTATCCTGCGTCGGCCACCTTTGTCGATGTTGCTGGTAGAAGGCGCCAAATGGAGTCCTTACTAGTAGGGGAAGAAGTACAGGTCATCACCAACAAAGGTGTCACATCAAAGCCAGTCATAACCTTTATCCACCGTCAACCAGACCTTTTCCAAGAATTTCTGCAAATCACGACCTTGCGGTACAAGAAGATCCTGAAGATCACTGAAGACCATTTGATTTTTGTGGAGAAAAATGGCAAAGAAGCCGCCATTCCTGCCAGGGATGTCAAGATTGGAGACATGATTTACGTAAAGGTCGGAGGCAAGGAAATGTTAGAGACAGATGCGGTTCAGGGTGTTAGTATTGTTTTCGAGAAAGGTGTGTACGCCCCAGTGACCCTCAGTGGCACCATTCTAGTCAACGATGTCAACACCTCCTGCTACTTTGATGTGTTGTCTCATGTTTGGTTTCACAGAGCTATGGGAGCTGCGCGCGCAATGTATCACTTGTCTCCTAAGATGGCGGAATGGATCAGCAGTATCGGAGAAGAGGATGGATTCCCAGGATGGTGTCGGCTGGGGCATAAACTCTTGCTTACTTGGAATGATTCATCTTAA

Transcript

alor_g18258.t2

Protein

Uniprot

Uniprot term	Description
Q99JY3	GTPase IMAP family member 4 OS=Mus musculus OX=10090 GN=Gimap4 PE=1 SV=2
Q9NUV9	GTPase IMAP family member 4 OS=Homo sapiens OX=9606 GN=GIMAP4 PE=1 SV=1
Q8K3K9	GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04548	AIG1	AIG1 family	Domain	Interproscan
PF01079	Hint	Hint module	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001657	Family	Hedgehog protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006703	Domain	AIG1-type guanine nucleotide-binding (G) domain	Interproscan
IPR003587	Domain	Hint domain N-terminal	Interproscan
IPR036844	Homologous_superfamily	Hint domain superfamily	Interproscan
IPR045058	Family	GTPase GIMA/IAN/Toc	Interproscan
IPR001767	Domain	Hedgehog protein, Hint domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10903	GTPASE, IMAP FAMILY MEMBER-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007267	Biological Process	cell-cell signaling	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0016540	Biological Process	protein autoprocessing	Interproscan