Gene detail

Detailed information of alor_g18262.t1 in Acropora loripes

Genomic Location: Acropora_loripes_242:39482...43018
NR annotation: XP_015763679.1, PREDICTED: Down syndrome cell adhesion molecule-like protein Dscam2 isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR051427	Family	Nectin and Nectin-like	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23277	NECTIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005912	Cellular Component	adherens junction	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007157	Biological Process	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K21668	CD200R; cell surface glycoprotein CD200 receptor	-	Kaposi sarcoma-associated herpesvirus infection	ko05167	deepkoala