Detailed information of alor_g18856.t1 in Acropora loripes

Genomic Location: Acropora_loripes_17:3723243...3746206
NR annotation: XP_029200344.2, LOW QUALITY PROTEIN: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O70340Neuronal pentraxin-2 OS=Mus musculus OX=10090 GN=Nptx2 PE=1 SV=1
P47972Neuronal pentraxin-2 OS=Homo sapiens OX=9606 GN=NPTX2 PE=1 SV=2
P97738Neuronal pentraxin-2 OS=Rattus norvegicus OX=10116 GN=Nptx2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF02494HYRHYR domainDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051360FamilyNeuronal Pentraxin and RelatedInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR003410DomainHYR domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19277PENTRAXINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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