Detailed information of alor_g19150.t1 in Acropora loripes

Genomic Location: Acropora_loripes_39:399604...413548
NR annotation: XP_044174476.1, hercynylcysteine sulfoxide lyase-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Z1N5Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1
Q63413Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3
Q5WR10Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris OX=9615 GN=DDX39B PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00266Aminotran_5Aminotransferase class-VDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR000192DomainAminotransferase class V domainInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43092L-CYSTEINE DESULFHYDRASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan

TOP