Detailed information of alor_g19428.t1 in Acropora loripes

Genomic Location: Acropora_loripes_179:483621...494854
NR annotation: XP_044176236.1, LOW QUALITY PROTEIN: cytoplasmic dynein 2 heavy chain 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q27802Cytoplasmic dynein 2 heavy chain 1 OS=Tripneustes gratilla OX=7673 GN=DYH1B PE=2 SV=2
Q8NCM8Cytoplasmic dynein 2 heavy chain 1 OS=Homo sapiens OX=9606 GN=DYNC2H1 PE=1 SV=4
Q45VK7Cytoplasmic dynein 2 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync2h1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03028Dynein_heavyDynein heavy chain region D6 P-loop domain DomainInterproscan
PF18199Dynein_CDynein heavy chain C-terminal domainDomainInterproscan
PF18198AAA_lid_11Dynein heavy chain AAA lid domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026983FamilyDynein heavy chainInterproscan
IPR043160Homologous_superfamilyDynein heavy chain, C-terminal domain, barrel regionInterproscan
IPR004273DomainDynein heavy chain region D6 P-loop domainInterproscan
IPR041228DomainDynein heavy chain, C-terminal domainInterproscan
IPR041658DomainDynein heavy chain AAA lid domainInterproscan
IPR042219Homologous_superfamilyDynein heavy chain AAA lid domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45703DYNEIN HEAVY CHAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0008569Molecular Functionminus-end-directed microtubule motor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20475SEC39, DSL3; protein transport protein SEC39-Membrane traffickingko04131deepkoala

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