Gene detail

Detailed information of alor_g20653.t1 in Acropora loripes

Genomic Location: Acropora_loripes_43:1125074...1148931
NR annotation: XP_044174296.1, LOW QUALITY PROTEIN: kinesin-like protein unc-104 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

alor_g20653.t1

ATGCTTGGTCCTTATGTAGAGGACTTGACTAAACTTGCTGTTACTTCATTTGCTGATATAAATGATCTGATTGATGAAGGAAATAAAGCCAGAACGGTAGCTGCTACCAACATGAATGAAACAAGCAGCAGGTCACATGCTATTTTCAGCATTGTATTCACCCAAAGAAGCCTCGATTCCCTGTCTGACCTTCCCTCAGCAAAGGTTAGCAAGTTGAGTTTGGTGGATCTTGCTGGAAGTGAGAGAGCAGATGCAACTGGAGCAAAAGGAGAAAGACTCAAGGAAGGTGCAAATATCAACAAGTCATTGACAACATTGGGAAAAGTGATATCTTCTCTAGCTGAGCAGTGCTCTCAAAAGAAAAAAAGGAAGTCAGATTTCATACCTTACAGAGATTCTGTTCTGACATGGCTGTTGAAGGAAAATCTAGGTGGCAACTCCAAGACAGCAATGATCGCTGCTATCAGTCCAGCAGATATCAACTTTGAGGAAACTTTAAGTACACTAAGGTACGCTGATCGGGCGAAGCAGATTGTGTGTAAAGCAATCATCAATGAAGATCCTAATGCAAAGATCATCAGAGAATTAAAAGAGGAGGTTTCAAAGCTAAAGGAACTTCTTGTCATTGAAGGCTACAACCCTGAAGATCTTCAATCAGCATTAAAGCAAGGTAGCTCTACGCACTTAACCCGGAGACAAAGCCAAGATTCTCATGATGGTACCCTGGACAAGCTTAAGACATCTGAAAAACTTATAGCTGAACTCAATGAAACATGGGAGGAGAAGCTGCGGAAAACAGAAGCCATTAAACTAGAGAGGGTAGGTCAGTCTGGAGCTAAAAGCCATCAGGATATACAGCTGAGTGGAGAAAACATTTTGGACGAACATTGCGTTTTAGAGCATACTCCAGGCTTGGTGAAAATAATTCCTTGCAAAAATAGCCGTACTTTTGTAAATGGGAAACTGGTGACGGAATCAACCGTTTTGCGATCAGGAGCACGTATCATTTTGGGAAACAATCACGTATTCAGGTTTAATTTCCCTGATCAAGCCCGTGAAGAAAGAATCCGTCGATCACAAGGAAATCTGCTTTCGATTGAAGTTACAAACGGTAAAAGTGAGGCAAAAGCTGAAGATCCCGTGGACTGGTCATTCGCTGTACTGGAACTGTTGAGAGAACAGGGATGGGACGTCAAAGAAATGAATGACAGGGTACAAGAGTTAGAGGAGCAAATCAAGAAAGAAAAGGATCAAGCAGATTTGCTATTGCAACAGCAGAGACTGGCATATGAAATCAGGCTGCAAGAATTGCAGCGACAGGTGGACGTGTCATCTGTCCCTTCCAGCGAATCAGTAGACAGTGACATTGACGTGGAAAGCTTTGAAAGTGAGAGCCCGTTGACCGAGCGTGAGCTCAATTTGGCAGAATTAGTTTTGGACAAGTGGAAGTGTTATCAGTGTACGTCACTGAGGGATGACTTGTTAAGTCATGCAGTTTTGTTAAAAGAAGCAAATGCAATTAGCGTGGAGCTGGGGAAGAAGGTGGAGTTTCAGTTCTCTCTGCTAACTGACACACTCTACACTCCTCTGCCTTCATTCCTCGCGGCTGATGTCAGGGATCGACTTGAAGATATGCGCCTCATGTACGACACTGCAGCTGAATGCAACAGTAATGTTTCCTTTGACTCAGCTGATCCTTTCTATGATTCTCTACCTTGGTTCAGACTTGTTGGAAGATCCTTTGTATACCTGAGTAACTTGCTGTATGGTGTTCCGCTAGAGCAAAAGGCGCCGATTGTAAGTGACTCGGGAGACATACAAGGTCATCTTGTCATCAACGTCGAGCAGTGTACAGACGAGCAAATGTGGGGCGTGGATCGAGATGGTCGGCCTAATGTGATGTGGCTGGAGTTTCCATCTGAAAACCGCGAGAAAGCAAATATTCGATCTGATGACCGAGAAAGTAAACCTGGTGTTAAGGCGGCAGAGGAAGCTGCAGAAGCTGACACAGCGACCGAGCCTCCGTTTTCCAAGGGTACACTTCTTGTTGGGCAACGTTTCGTGATGAGCATCACGGTACTGCAGGCTCAAGGCATTCCAGTTCCATACACAGACGTCTTTTGTCAGATACGGTTTCTTTGCAGCGAAGAAGATGAGGGATTTTCCACCGAGCCAGTGGAAAATAACTTAGCGGATAAACCTTTGATGTTTGAATACTGTCAGAAGGTTGGTGTGATAGTAAACCGCGCTTTCATCGACTATATCAGCACCAGTCCCTTGCAAGTTGAAGTGTTTGGACACTATCAACGTCAGCCACAGTATCTCTCCAATGAAAAACTTCCAAGTGAAGATGAAGGAATTCTGAAGTTTGATTTACTAGTGTGGACTGAAGTGCACGAAATGACTCCAACTGGAGATTATTTTCCATGTGTTGTAAGACGTAAAAATGAAGACAGCTCTTGTGGTGGTGTCTTTCTGTTACATCAGGGGATTCAAAGGCGACTTGTCGTCACTGTAATACACGAGAATTCTCCAGATGTAAGAATACGACGAGTTGCAGATCTTGTTATCGGTCATGCCAGGACTTCTCTTGTGCCTCCCAATTCAGCGGAGACATCGCCTGAAATGGTCTCTTTAAATGTCGTGTTGCATCAGTTCCAGTCTCACCCGGATGAAAACAAATCTGTGTATCGATTCGAGGCGGCCTGGGACTCCTCTCTTCATAACTCAGTACTACTGAACAGGGTGACTCCATCGGGGGAGCTGGTGTTTGTTACCTTGTCAACTTATCTTGAGATGGAAAACTGTTGCCAGTCTTGTTGCATTACCAAGGAACTTTCTTTGTGTGTGTTTGGTAGAGATTCCAAAACATCCCCACGATCCTTGTGGAGTTTATTTGGTTCGTCAAGGCGTCCTGTGAATGATAAAACCAGTGATTTGTTTGAGCTTGTTTTCCATCCAGCTGATGAACATGGCCAGCTGCTTAAAGCAAAAAGAAGGGTGGTTATGGACACTTCAAAAATTTATGTGAGAGGAGAAGAGAACCTCGGAGACTGGAAACCAAGGGGCACATCGCTCATTGAAGAACATCGAGTGCATTTAGAGAAACTAGAACGAGTTCAGGAGGTGGGCAAAGCCCGTCATATTCTTTCGCTTGGAGACAAGCTTATGTCCTCTGATCGCCCGGATTCCGCGTTGTTAGCCGATTCAGGTGTCATCTCTGACGGCAGCACTTATTCCAGTCGTGGTAGCCTGGGTTCTATTTCTCTGTCCTCCTCGTTCCTGTCATTAGCATCACTTCCGGCTGGCAAGTCTCGGCCTTGCACAACAAATGCAGACCCGGAGAAAGCTAGACAAAATTTGTTACAAGTGTGTGTTGATTTGATGACACGGAAAAGGAATGTTAGGAAAATTATGAGTCGTACGGCTTCATCCGAGGCGGGCAAAAGTCACCAATACGGAAACGATGGAGAATGTTACATTGAGTACTATGTTCCAGAGTTGCATCAAATCAGGAAAAACCCAGTGATTAGTAAAAAAGGATATCTTCATATCATGGACGACTGCACTTCTAGATGGGCCAAGTGTTATGTGGTCGTGAGAAAACCTTACATGCTGCTTTATCGCCAGGAAGGTGATCCGGTCGAGCAGTTTATGATTAATCTCAAGCACTCTAAAGTTGAGTGTCCTGAATATTTTGGGACGTTTAGTGTTTTCTCAATTCATAGCAAACAGTGTAGATTTCTTGTCCGAACTACCACCGAGAAAGAACAAGACGCCTTTGATTGGCTTTACGCACTTGACCCCCTGTTGGTAGGAAGCATAAGGTCAAGGAAAGGAGTTGTAAAAGAAGGTGGGAGGTGA

Transcript

alor_g20653.t1

Protein

Uniprot

Uniprot term	Description
Q7PHR1	Kinesin-like protein unc-104 OS=Anopheles gambiae OX=7165 GN=unc-104 PE=3 SV=3
Q28WQ1	Kinesin-like protein unc-104 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=unc-104 PE=3 SV=1
Q17BU3	Kinesin-like protein unc-104 OS=Aedes aegypti OX=7159 GN=unc-104 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00498	FHA	FHA domain	Family	Interproscan
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF16183	Kinesin_assoc	Kinesin-associated	Family	Interproscan
PF12473	DUF3694	Kinesin protein	Family	Interproscan
PF12423	KIF1B	Kinesin protein 1B	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR032405	Domain	Kinesin-associated	Interproscan
IPR022164	Domain	Kinesin-like	Interproscan
IPR022140	Domain	Kinesin-like KIF1-type	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47117	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10392	KIF1; kinesin family member 1	-	Cytoskeleton proteins	ko04812	deepkoala