Detailed information of alor_g20937.t1 in Acropora loripes

Genomic Location: Acropora_loripes_61:488492...495814
NR annotation: XP_015752236.1, PREDICTED: LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing protein 4-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O60294tRNA wybutosine-synthesizing protein 4 OS=Homo sapiens OX=9606 GN=LCMT2 PE=1 SV=3
Q5XIA3tRNA wybutosine-synthesizing protein 4 OS=Rattus norvegicus OX=10116 GN=Lcmt2 PE=2 SV=1
Q8BYR1tRNA wybutosine-synthesizing protein 4 OS=Mus musculus OX=10090 GN=Lcmt2 PE=2 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04072LCMLeucine carboxyl methyltransferaseFamilyInterproscan
PF13418Kelch_4Galactose oxidase, central domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR007213FamilyMethyltransferase Ppm1/Ppm2/TcmpInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46529TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0008175Molecular FunctiontRNA methyltransferase activityInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0031591Biological Processwybutosine biosynthetic processInterproscan

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