Detailed information of alor_g21823.t1 in Acropora loripes

Genomic Location: Acropora_loripes_34:2278191...2301744
NR annotation: XP_029212828.2, A disintegrin and metalloproteinase with thrombospondin motifs 2-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O95450A disintegrin and metalloproteinase with thrombospondin motifs 2 OS=Homo sapiens OX=9606 GN=ADAMTS2 PE=1 SV=2
Q8C9W3A disintegrin and metalloproteinase with thrombospondin motifs 2 OS=Mus musculus OX=10090 GN=Adamts2 PE=1 SV=2
P79331A disintegrin and metalloproteinase with thrombospondin motifs 2 OS=Bos taurus OX=9913 GN=ADAMTS2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01847VHLVHL beta domainDomainInterproscan
PF05986ADAMTS_spacer1ADAM-TS Spacer 1DomainInterproscan
PF19030TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF19236ADAMTS_CR_3ADAMTS cysteine-rich domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000998DomainMAM domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR024053Domainvon Hippel-Lindau disease tumour suppressor, beta domainInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR010294DomainADAMTS/ADAMTS-like, Spacer 1Interproscan
IPR037140Homologous_superfamilyvon Hippel-Lindau disease tumour suppressor, beta domain superfamilyInterproscan
IPR036208Homologous_superfamilyVHL superfamilyInterproscan
IPR013273FamilyADAMTS/ADAMTS-likeInterproscan
IPR010909DomainPLACInterproscan
IPR045371DomainADAMTS/ADAMTS-like, cysteine-rich domain 3Interproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan

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