Detailed information of alor_g22360.t1 in Acropora loripes

Genomic Location: Acropora_loripes_176:376813...385552
NR annotation: XP_029203888.2, rab9 effector protein with kelch motifs-like [Acropora millepora]
Species abbreviation ALORI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8VCH5Rab9 effector protein with kelch motifs OS=Mus musculus OX=10090 GN=Rabepk PE=1 SV=2
Q4V8F4Rab9 effector protein with kelch motifs OS=Rattus norvegicus OX=10116 GN=Rabepk PE=2 SV=1
Q7Z6M1Rab9 effector protein with kelch motifs OS=Homo sapiens OX=9606 GN=RABEPK PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008454 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01344
all species →		Kelch_1Kelch motifRepeatInterproscan
PF13418
all species →		Kelch_4Galactose oxidase, central domainRepeatInterproscan
PF13415
all species →		Kelch_3Galactose oxidase, central domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006652
all species →		RepeatKelch repeat type 1Interproscan
IPR011043
all species →		Homologous_superfamilyGalactose oxidase/kelch, beta-propellerInterproscan
IPR052124
all species →		FamilyRab9 effector with kelch motifsInterproscan
IPR015915
all species →		Homologous_superfamilyKelch-type beta propellerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46647
all species →		RAB9 EFFECTOR PROTEIN WITH KELCH MOTIFSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for alor_g22360.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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