Gene detail

Detailed information of alor_g22932.t1 in Acropora loripes

Genomic Location: Acropora_loripes_11:3883639...3894556
NR annotation: XP_015752954.1, PREDICTED: NEDD8-conjugating enzyme Ubc12-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q9VSF3	Nedd8-conjugating enzyme UbcE2M OS=Drosophila melanogaster OX=7227 GN=UbcE2M PE=1 SV=1
A3KN22	NEDD8-conjugating enzyme Ubc12 OS=Bos taurus OX=9913 GN=UBE2M PE=2 SV=1
P61081	NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens OX=9606 GN=UBE2M PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E2\|UBC\|UBC
Ubiquitin Family	UBD\|UBC-like\|UBC

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00179	UQ_con	Ubiquitin-conjugating enzyme	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000608	Domain	Ubiquitin-conjugating enzyme E2	Interproscan
IPR023313	Active_site	Ubiquitin-conjugating enzyme, active site	Interproscan
IPR016135	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0019788	Molecular Function	NEDD8 transferase activity	Interproscan
GO:0045116	Biological Process	protein neddylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10579	UBE2M, UBC12; ubiquitin-conjugating enzyme E2 M	EC:2.3.2.34	Ubiquitin system	ko04121	deepkoala