Gene detail

Detailed information of alor_g23029.t1 in Acropora loripes

Genomic Location: Acropora_loripes_93:617600...620114
NR annotation: XP_029189601.2, tumor susceptibility gene 101 protein-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q94HV7	E3 ubiquitin-protein ligase SPL1 OS=Arabidopsis thaliana OX=3702 GN=SPL1 PE=2 SV=1
Q6R7I2	Putative apoptosis inhibitor ORF42 OS=Ostreid herpesvirus 1 (isolate France) OX=654903 GN=ORF42 PE=4 SV=1
Q86YT6	E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens OX=9606 GN=MIB1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING
Ubiquitin Family	UBD\|UBC-like\|UEV

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05743	UEV	UEV domain	Domain	Interproscan
PF13920	zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016135	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR008883	Domain	Ubiquitin E2 variant, N-terminal	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46858	OS05G0521000 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015031	Biological Process	protein transport	Interproscan
GO:0036211	Biological Process	protein modification process	Interproscan
GO:0007049	Biological Process	cell cycle	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22651	RNF4; E3 ubiquitin-protein ligase RNF4	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala