Gene detail

Detailed information of alor_g23173.t1 in Acropora loripes

Genomic Location: Acropora_loripes_93:2317240...2317959
NR annotation: XP_029202344.2, chondroitin sulfate synthase 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q6ZQ11	Chondroitin sulfate synthase 1 OS=Mus musculus OX=10090 GN=Chsy1 PE=2 SV=2
Q86X52	Chondroitin sulfate synthase 1 OS=Homo sapiens OX=9606 GN=CHSY1 PE=1 SV=3
Q5DTK1	Chondroitin sulfate synthase 3 OS=Mus musculus OX=10090 GN=Chsy3 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05679	CHGN	Chondroitin N-acetylgalactosaminyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051227	Family	Chondroitin sulfate glycosyltransferase	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR008428	Family	Chondroitin N-acetylgalactosaminyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12369	CHONDROITIN SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008376	Molecular Function	acetylgalactosaminyltransferase activity	Interproscan
GO:0030206	Biological Process	chondroitin sulfate biosynthetic process	Interproscan
GO:0047238	Molecular Function	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity	Interproscan
GO:0032580	Cellular Component	Golgi cisterna membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07270	K07270; glycosyl transferase, family 25	-	Glycan metabolism	-	deepkoala