Detailed information of alor_g23503.t1 in Acropora loripes

Genomic Location: Acropora_loripes_4:2329910...2340684
NR annotation: XP_015759994.1, PREDICTED: tripartite motif-containing protein 67-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O60260E3 ubiquitin-protein ligase parkin OS=Homo sapiens OX=9606 GN=PRKN PE=1 SV=2
Q9JK66E3 ubiquitin-protein ligase parkin OS=Rattus norvegicus OX=10116 GN=Prkn PE=1 SV=1
Q9WVS6E3 ubiquitin-protein ligase parkin OS=Mus musculus OX=10090 GN=Prkn PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|RBR

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17978zf-RING_14RING/Ubox like zinc-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047153FamilyTRIM45/56/19Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR041170DomainRING/Ubox-like zinc-binding domainInterproscan
IPR047534DomainE3 ubiquitin-protein ligase parkin, BRcat domainInterproscan
IPR003977FamilyE3 ubiquitin-protein ligase parkinInterproscan
IPR002867DomainIBR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

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