Detailed information of alor_g23505.t1 in Acropora loripes

Genomic Location: Acropora_loripes_4:2345754...2353009
NR annotation: XP_044178114.1, LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase parkin-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9WVS6E3 ubiquitin-protein ligase parkin OS=Mus musculus OX=10090 GN=Prkn PE=1 SV=1
Q9JK66E3 ubiquitin-protein ligase parkin OS=Rattus norvegicus OX=10116 GN=Prkn PE=1 SV=1
O60260E3 ubiquitin-protein ligase parkin OS=Homo sapiens OX=9606 GN=PRKN PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF17978zf-RING_14RING/Ubox like zinc-binding domainDomainInterproscan
PF17976zf-RING_12RING/Ubox like zinc-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047535DomainE3 ubiquitin-protein ligase parkin, RING finger, HC subclassInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR003977FamilyE3 ubiquitin-protein ligase parkinInterproscan
IPR041170DomainRING/Ubox-like zinc-binding domainInterproscan
IPR041565DomainParkin, RING/Ubox like zinc-binding domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
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 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

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