Gene detail

Detailed information of alor_g23736.t1 in Acropora loripes

Genomic Location: Acropora_loripes_4:5035336...5038101
NR annotation: BAV53108.1, brachyury transcription factor [Acropora digitifera]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O15178	T-box transcription factor T OS=Homo sapiens OX=9606 GN=TBXT PE=1 SV=1
Q9GL27	T-box transcription factor T OS=Canis lupus familiaris OX=9615 GN=TBXT PE=2 SV=1
P20293	T-box transcription factor T OS=Mus musculus OX=10090 GN=Tbxt PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	T-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00907	T-box	T-box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001699	Family	T-box transcription factor	Interproscan
IPR018186	Conserved_site	Transcription factor, T-box, conserved site	Interproscan
IPR046360	Domain	T-box transcription factor, DNA-binding domain	Interproscan
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR002070	Family	Transcription factor, Brachyury	Interproscan
IPR036960	Homologous_superfamily	T-box superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11267	T-BOX PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0001707	Biological Process	mesoderm formation	Interproscan
GO:0001708	Biological Process	cell fate specification	Interproscan
GO:0001756	Biological Process	somitogenesis	Interproscan
GO:0003007	Biological Process	heart morphogenesis	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10172	BRA, T; brachyury protein	-	Transcription factors	ko03000	deepkoala