Detailed information of alor_g24178.t1 in Acropora loripes

Genomic Location: Acropora_loripes_2:348380...357070
NR annotation: XP_015764126.1, PREDICTED: general transcription factor IIH subunit 2-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JIB4General transcription factor IIH subunit 2 OS=Mus musculus OX=10090 GN=Gtf2h2 PE=1 SV=1
A0JN27General transcription factor IIH subunit 2 OS=Rattus norvegicus OX=10116 GN=Gtf2h2 PE=1 SV=1
Q2TBV5General transcription factor IIH subunit 2 OS=Bos taurus OX=9913 GN=GTF2H2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07975C1_4TFIIH C1-like domainDomainInterproscan
PF04056Ssl1Ssl1-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR012170FamilyTFIIH subunit Ssl1/p44Interproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR004595DomainTFIIH C1-like domainInterproscan
IPR007198DomainSsl1-likeInterproscan
IPR046349Homologous_superfamilyC1-like domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12695GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000439Cellular Componenttranscription factor TFIIH core complexInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03142TFIIH2, GTF2H2, SSL1; transcription initiation factor TFIIH subunit 2-DNA repair and recombination proteinsko03400deepkoala

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