Gene detail

Detailed information of alor_g24651.t1 in Acropora loripes

Genomic Location: Acropora_loripes_2:6082887...6088272
NR annotation: XP_029191406.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114957974 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

alor_g24651.t1

ATGGGTGAAAAGCGAGATTACTCACAGGTGGAGTCTACTCTTGTCTCAGATGGTCACCAAATGACAATGAAACCCAGGAAAAAAGGGCAGAGAATTGATAAAGAAGAGATTGCTTCATTTCAGAGTAAAATTTCTGCGGAAGAAAATGGCAGTGGTGATCAAGACAGAGATACAGAGTTGCCTAAAATGGTAAAAAGGGATTTGTTGGAAGAAGCTGTTAGCCCTGAAAACACAATGGAACAAGATCTACAGTCCAATGACAATTCTGTGTCAGTTGATCAGGGAGCCAACACTTCCTTGTCAAAGCGCCTTCGTATGTACAAGTGTGAACGCTGTAAATCCCAATACATGGGATTGGCAATGTTGCGTCAACACTGCAAGGATGTTCATGGTGACCAGAAATACTACAAATGTAATGTTTGTGGCAAGTTATTTAGCCATCCCAGTAGCAGGAACATCCACTTGCGTCTTCACTCAGGAGAGAAACCTTACAAGTGTAGCACTTGTGGCAAGAAGTTCAGGGTTTCATCGCATTTGAAGGACCATGTTAGGGTACACACAGGGGAGCGTCCTTATATCTGTGACATTTGCCATAAGGGATTTAAGCAATCCAGTGACCTCAAGAAGCATCGACGCACACACACCTTGGACAAACCTTACAAGTGTCCCATTTGTCCCTCTGCCTTCACTCGCTCACATCATTGCCGTGGACACATCAACTCAGTTCACAAGTTTTACAAATGTGGAGTTTGTAGTGCTTTGTTTACGTCTGAGGAAGCATTTGAACAACATAAGGAATTACATCCAACATTCTTCTCTGATCAGTCAAAAACATCATCAGACATTGCTCCTCCGGATTCAAGTGGGGTAGTTCAAGTTTCTGCTCCTCAAGACACTAAGGCAGATGACACTGATATGCATGAGAAGAACCTGAAATGGGATGTTGCAAATCAATTGCTTGAGCTTCATAAGGTCTCGCAACATGTTTCCTCATTAAAGAATGCTAATGGCTGTGGATCAGAAACAGCCTCAGAGTCTGGTGATAAACTGAAATCTTCTTTGCATAGGTCATCAGAGGTAGTCCAAAATGCTGATGTGAGATCGCAGCCATCATGTACTGTTAATCCTTCGTTGACTTATCAGGCAACAAGCACTGATACTTCATCTTCCAGTCACATGGCTAGCCCATTTTTAACACCCGTGGGGGCAAATCAGGGGGGAGGGTTCTTCACCAGATCAGCGGTGGTCAAAGAGAACAGTGTTGCGACATCTTTGGATAATAGTCAAACAATCCCTCAAGGTGTTGAATATCATAGGATGTCATTTCAAAATCCTTACTTTGGAGCTAAGAACTCTCTTCCAATCACAGAAAATGGTTTACAAAAGAGTCTGTCACCTTTTCTGCATTCACCAAGTCCTGGTAAACACTTTCCAGCTGACACATTGGAGCAGAGAGAACTTGTATTAAATCAAATTTATGACGTCTATTCCAAGATGAAGGGCTTTCCCCATCAACAGGTACATTTTGTGCTAAATCCTGTTAGTACAAGTCAAAATTGGAATTTTATAGGGCACAGCCCCAGGGGAGAAAAATCTCAACCCAATGCTGAAGTTCAGAACCCTCAGGGCAATAACAAAGTGCCATGCCATCGCGTATCAGTCATTCAGTACCATTCCAGTGAGTCAAAACTTGTGAATGATTTAAACAATGAAGAGCATTTGCCCAAAAACAGAAATACTTCGCTTACTGCATTGCCCTTATCCAAGGAATGTGAATCTACTAGACCAGACAGAAAATCTCAAATCCAAGAGCTATCTGAAAGGGCCAGGCCTATGAAAGAAGACTTTTTTCCTGGATTTTCTCAAGATAGGGCACCATATGTTCCAGTTAATTCTGATAGCTTAATAGGAGTGCAATCATCACATCAAAAACTTGATGAGCCATTGGGAAAGTACTGTATGGCTTTAAAGGAAGCTGTGGAGATCCATGAGAAAGCAAGGGAACAGGAACAAGCCAAGCAGGTTTCTTTGAAGCAGTCAGCAGAAATCAAGCGATTGAGTATGCTTTCCGAAGGAAATGCTCAGCCAATAACAAGTACTTTTGACAGATTGCATGTGACATCTGTAGACATGTTGAAGTTTTTGGCTCGAGAGCAAACCAGACAAGGAAGTGGGGAAGGAGATATGAAGTCTCCTCCATCGGGAGGAGAGGAATCAGAAGCATCTGAGGCATACAAAACTGGAGATGTAGCTCTCAATGGACAGGTTTTCATGGATGAAGGCGAGAATTCGGTACAGCAAAATTCCTCAGGTGAAAGGCCATTTAAGTGCCATATTTGTGAAAAAGCATTCAAGCAATCTAGTGATCTTAAGAAGCACATCAACCTTCACACTGGTGCAAATCAATTCAAGTGTGAGGAGTGCAACATGGAGTTTCGCAGAGCTGATGCACTTAGAAAGCACAAGTTGGGGCACAAGATGGGAAACATGCCTTGTGGGCACTGTGGAAAGAACTTCATGCACATCAGCGCATTGAGGCAGCACAGAGCTATGCACAATGTGCAGCCAGTGAAAACAAACAGAACCTTTCACAGATGCAACTACTGCTTCAAAACATTTACAAAAGCTGAAAGTTATAAGCTTCACATGGAAGAGCACATCAGAGAGCAGAGCATTACACTGTTTGACTGCAAAATCTGCTCCTTGAAATTCTTTAGCAAAGCAGAATTCACAGATCACATGAACATCCACAATGGCAAGAGACCATACAAGTGTTTCATCTGTGAAAAGGAATTCTGCATTGCTGAGCATTTGCAGGATCATGTCAGGCTTCATACGGATGTGCCAGCGAGAATCAGTAATAATAATAATAATTGTGAATGTTAG

Transcript

alor_g24651.t1

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2H2
Transcription Factors Family	zf-GAGA

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23226	ZINC FINGER AND SCAN DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan