Detailed information of alor_g25647.t1 in Acropora loripes

Genomic Location: Acropora_loripes_75:1650781...1698310
NR annotation: XP_044182330.1, structural maintenance of chromosomes protein 1A-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O93308Structural maintenance of chromosomes protein 1A OS=Xenopus laevis OX=8355 GN=smc1a PE=1 SV=1
Q9Z1M9Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1
O97593Structural maintenance of chromosomes protein 1A OS=Bos taurus OX=9913 GN=SMC1A PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06470SMC_hingeSMC proteins Flexible Hinge DomainDomainInterproscan
PF02463SMC_NRecF/RecN/SMC N terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010935DomainSMCs flexible hingeInterproscan
IPR028468DomainSmc1, ATP-binding cassette domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003395DomainRecF/RecN/SMC, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18937STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0051276Biological Processchromosome organizationInterproscan
GO:0007062Biological Processsister chromatid cohesionInterproscan
GO:0008278Cellular Componentcohesin complexInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

TOP