Detailed information of alor_g25648.t1 in Acropora loripes

Genomic Location: Acropora_loripes_75:1705310...1742085
NR annotation: XP_044182329.1, structural maintenance of chromosomes protein 1A-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O93308Structural maintenance of chromosomes protein 1A OS=Xenopus laevis OX=8355 GN=smc1a PE=1 SV=1
O97593Structural maintenance of chromosomes protein 1A OS=Bos taurus OX=9913 GN=SMC1A PE=1 SV=1
Q14683Structural maintenance of chromosomes protein 1A OS=Homo sapiens OX=9606 GN=SMC1A PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02463SMC_NRecF/RecN/SMC N terminal domainDomainInterproscan
PF06470SMC_hingeSMC proteins Flexible Hinge DomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036277Homologous_superfamilySMCs flexible hinge superfamilyInterproscan
IPR003395DomainRecF/RecN/SMC, N-terminalInterproscan
IPR010935DomainSMCs flexible hingeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18937STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0051276Biological Processchromosome organizationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007062Biological Processsister chromatid cohesionInterproscan
GO:0008278Cellular Componentcohesin complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06636SMC1; structural maintenance of chromosome 1-Chromosome and associated proteinsko03036deepkoala

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