Genomic Location: Acropora_loripes_96:1322236...1340151
NR annotation: XP_029189240.2, tripeptidyl-peptidase 2-like isoform X1 [Acropora millepora]
Species Acropora loripes · all data for this species · gene families
| CDS |
| alor_g26712.t1 |
| Transcript |
| alor_g26712.t1 |
| Protein |
| alor_g26712.t1 |
| UniProt accession | Description |
|---|---|
| Q64560 | Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3 |
| P29144 | Tripeptidyl-peptidase 2 OS=Homo sapiens OX=9606 GN=TPP2 PE=1 SV=4 |
| A5PK39 | Tripeptidyl-peptidase 2 OS=Bos taurus OX=9913 GN=TPP2 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002921 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12583 all species → | TPPII_C | Tripeptidyl peptidase II, C-terminal | Domain | Interproscan |
| PF21223 all species → | TPPII_Ig-like-1 | Tripeptidyl-peptidase II, first Ig-like domain | Domain | Interproscan |
| PF12580 all species → | TPPII | Tripeptidyl peptidase II | Family | Interproscan |
| PF00082 all species → | Peptidase_S8 | Subtilase family | Domain | Interproscan |
| PF21316 all species → | TPPII_GBD | TPPII, galactose-binding domain-like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015500 all species → | Family | Peptidase S8, subtilisin-related | Interproscan |
| IPR036852 all species → | Homologous_superfamily | Peptidase S8/S53 domain superfamily | Interproscan |
| IPR022232 all species → | Domain | Tripeptidyl peptidase II, C-terminal domain, arthropoda | Interproscan |
| IPR022398 all species → | Active_site | Peptidase S8, subtilisin, His-active site | Interproscan |
| IPR048383 all species → | Domain | Tripeptidyl-peptidase II, first Ig-like domain | Interproscan |
| IPR022229 all species → | Domain | Tripeptidyl peptidase II, second Ig-like domain | Interproscan |
| IPR000209 all species → | Domain | Peptidase S8/S53 domain | Interproscan |
| IPR023828 all species → | Active_site | Peptidase S8, subtilisin, Ser-active site | Interproscan |
| IPR034051 all species → | Domain | Tripeptidyl-peptidase II domain | Interproscan |
| IPR046939 all species → | Homologous_superfamily | Tripeptidyl-peptidase 2, C-terminal domain superfamily | Interproscan |
| IPR048384 all species → | Domain | Tripeptidyl-peptidase II, galactose-binding domain-like | Interproscan |
| IPR046940 all species → | Homologous_superfamily | Tripeptidyl peptidase II, Ig-like domain superfamily | Interproscan |
| IPR050131 all species → | Family | Subtilisin-like serine protease | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43806 all species → | PEPTIDASE S8 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004252 all species → | Molecular Function | serine-type endopeptidase activity | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0008236 all species → | Molecular Function | serine-type peptidase activity | Interproscan |
| GO:0008240 all species → | Molecular Function | tripeptidyl-peptidase activity | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01280 | TPP2; tripeptidyl-peptidase II | EC:3.4.14.10 | Chaperones and folding catalysts | ko03110 | deepkoala |
Genes whose expression across the transcriptome samples of Acropora loripes tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Acropora loripes, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
