Detailed information of alor_g2718.t1 in Acropora loripes

Genomic Location: Acropora_loripes_77:1313176...1334175
NR annotation: XP_044184833.1, LOW QUALITY PROTEIN: polycystin-1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q7Z442Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5
O08852Polycystin-1 OS=Mus musculus OX=10090 GN=Pkd1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00801PKDPKD domainDomainInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000601DomainPKD domainInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR014010DomainREJ domainInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan

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