Gene detail

Detailed information of alor_g2834.t1 in Acropora loripes

Genomic Location: Acropora_loripes_121:187882...188829
NR annotation: XP_029184207.2, uncharacterized protein LOC114952395 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P47236	Paired box protein Pax-1 (Fragment) OS=Gallus gallus OX=9031 GN=PAX1 PE=3 SV=1
P55166	Paired box protein Pax-9 (Fragment) OS=Gallus gallus OX=9031 GN=PAX9 PE=2 SV=1
Q2VL59	Paired box protein Pax-9 OS=Callimico goeldii OX=9495 GN=PAX9 PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	PAX

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00292	PAX	'Paired box' domain	Domain	Interproscan
PF13358	DDE_3	DDE superfamily endonuclease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001523	Domain	Paired domain	Interproscan
IPR038717	Domain	Tc1-like transposase, DDE domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46564	TRANSPOSASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan