Detailed information of alor_g3002.t1 in Acropora loripes

Genomic Location: Acropora_loripes_133:256520...278625
NR annotation: XP_044174144.1, jouberin-like isoform X3 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8K3E5Jouberin OS=Mus musculus OX=10090 GN=Ahi1 PE=1 SV=2
Q8N157Jouberin OS=Homo sapiens OX=9606 GN=AHI1 PE=1 SV=1
Q6DTM3Jouberin OS=Rattus norvegicus OX=10116 GN=Ahi1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR052803FamilyPrimary Cilium-Associated JouberinInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44499JOUBERINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0044458Biological Processmotile cilium assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16740AHI1; jouberin-Cilium and associated proteinsko03037deepkoala

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