Gene detail

Detailed information of alor_g3300.t1 in Acropora loripes

Genomic Location: Acropora_loripes_18:3743108...3747093
NR annotation: XP_029200247.2, probable transcriptional regulatory protein Kole_1935 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
C0QT62	Probable transcriptional regulatory protein PERMA_0079 OS=Persephonella marina (strain DSM 14350 / EX-H1) OX=123214 GN=PERMA_0079 PE=3 SV=1
B2A5L8	Probable transcriptional regulatory protein Nther_1800 OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) OX=457570 GN=Nther_1800 PE=3 SV=1
B8CXG6	Probable transcriptional regulatory protein Hore_12350 OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=Hore_12350 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01709	Transcrip_reg	TACO1/YebC second and third domain	Family	Interproscan
PF20772	TACO1_YebC_N	TACO1/YebC protein N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048300	Domain	TACO1/YebC-like, second and third domains	Interproscan
IPR017856	Homologous_superfamily	Integrase-like, N-terminal	Interproscan
IPR049083	Domain	TACO1/YebC-like, N-terminal domain	Interproscan
IPR002876	Family	Transcriptional regulator TACO1-like	Interproscan
IPR026564	Homologous_superfamily	Transcriptional regulator TACO1-like, domain 3	Interproscan
IPR029072	Homologous_superfamily	YebC-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12532	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18189	TACO1; translational activator of cytochrome c oxidase 1	-	Mitochondrial biogenesis	ko03029	deepkoala