Detailed information of alor_g3336.t1 in Acropora loripes

Genomic Location: Acropora_loripes_18:4214740...4223735
NR annotation: XP_029179574.2, uncharacterized protein LOC114947057, partial [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5DRD4Protocadherin beta-18 OS=Pan troglodytes OX=9598 GN=PCDHB18 PE=3 SV=1
G5EDK5Cadherin EGF LAG seven-pass G-type receptor fmi-1 OS=Caenorhabditis elegans OX=6239 GN=fmi-1 PE=1 SV=1
Q9Y5F6Protocadherin gamma-C5 OS=Homo sapiens OX=9606 GN=PCDHGC5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00047igImmunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR013151DomainImmunoglobulinInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR008983Homologous_superfamilyTumour necrosis factor-like domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

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