Detailed information of alor_g341.t1 in Acropora loripes

Genomic Location: Acropora_loripes_6:4916406...4936311
NR annotation: XP_044162701.1, protein jagged-1b-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P78504Protein jagged-1 OS=Homo sapiens OX=9606 GN=JAG1 PE=1 SV=3
A7SAZ1UPF0669 protein v1g209471 OS=Nematostella vectensis OX=45351 GN=v1g209471 PE=3 SV=1
Q9Y219Protein jagged-2 OS=Homo sapiens OX=9606 GN=JAG2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF01414DSLDelta serrate ligandDomainInterproscan
PF07657MNNLN terminus of Notch ligand C2-like domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF17065UPF0669Putative cytokine, C6ORF120FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001774DomainDelta/Serrate/lag-2 (DSL) proteinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR026219FamilyJagged/Serrate proteinInterproscan
IPR011651DomainNotch ligand, N-terminal domainInterproscan
IPR001007DomainVWFC domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR050906FamilyNotch signaling pathwayInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR031420FamilyUPF0669 protein C6orf120Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24044NOTCH LIGAND FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007154Biological Processcell communicationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005112Molecular FunctionNotch bindingInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP