Detailed information of alor_g3634.t1 in Acropora loripes

Genomic Location: Acropora_loripes_40:949580...980810
NR annotation: XP_044179538.1, integrin alpha-9-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B8JK39Integrin alpha-9 OS=Mus musculus OX=10090 GN=Itga9 PE=1 SV=1
Q13797Integrin alpha-9 OS=Homo sapiens OX=9606 GN=ITGA9 PE=1 SV=2
Q91687Integrin alpha-4 OS=Xenopus laevis OX=8355 GN=itga4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20805Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan
PF20806Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan
PF01839FG-GAPFG-GAP repeatRepeatInterproscan
PF08441Integrin_A_Ig_1Integrin alpha Ig-like domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000413FamilyIntegrin alpha chainInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR048285DomainIntegrin alpha, second immunoglobulin-like domainInterproscan
IPR013519RepeatIntegrin alpha beta-propellorInterproscan
IPR048286DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR018184Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR013649DomainIntegrin alpha, first immunoglubulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23220INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007155Biological Processcell adhesionInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06585ITGA9; integrin alpha 9-Cell adhesion moleculesko04515deepkoala

TOP