Gene detail

Detailed information of alor_g4774.t1 in Acropora loripes

Genomic Location: Acropora_loripes_56:146141...160371
NR annotation: XP_044177446.1, kinesin-like protein KIF3A [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

alor_g4774.t1

ATGCAGGTCGACTCGCAGTCCGACAATGTTCGCGTTGTTGTACGATGTCGGCCCATGAACGAAAAGGAAGTTGCTGGTGGATGTGGTTTGGCTGTTAATGTGGAAGAAAATCGTGGGATCATCACTGTGAAAAATACGGGTGCTCGCTCAGGAGAGCCACCAAAGCAGTTTACGTACGACAGAGTGTTTGGTGTTAATACCAAGCAAGTAGATGTATACAATGACGCAGCTAGGCCAATTGTAAATTGCGTGCTTGAAGGTTACAATGGAACAATTTTTGCATATGGGCAAACTGGTACAGGAAAGACATTTACCATGGAGGGTGTCCGGACAGTCCCTGAACTGCGTGGAATAATCCCAAACTCCTTTGCTCATATCTTTGGACACATTGCAAAGATGGATGGTGATATAAGGTTTTTAGTGAGGGTTTCATACTTGGAAATCTATAATGAAAGTGTGCGGGATCTTCTTGGAAAAGATCAGACTGCAACCCTTGAGGTGAAAGAGCGCCCAGATGTTGGTGTTTATGTGAAGGATTTATCCTCTTATGTTATGAACAATGCAGATGATTTGGACAAGACAATGACAGTTGGAAACAAAAACCGTTCTGTTGGTTCAACAAACATGAATGAGAGGTCATCACGTTCTCATGCCATTTTCACCATTACTGTGGAGTGCAGTGAAAAAGGTGCTGATGGGCAGCATCACGTTAGAATGGGCAAACTTCATTTGGTTGATTTGGCTGGGTCAGAAAGGCAAGCAAAAACTGGAGCTACCGGCCAAAGGCTAAAGGAAGCAACAAAAATTAACTTGTCCCTATCCACCCTGGGGAATGTTATCTCTGCATTGGTTGATGGCAAAAGCACACATATACCATACAGGAACTCAAAACTCACAAGACTTCTTCAAGATTCACTGGGTGGAAACTCTAAAACAGTCATGATTGCAAACATTGGTCCAGCTGATTATAACTTTGATGAAACAATAAGTACTCTCAGATATGCAAACCGTGCAAAGAACATCAAGAACAATGCCAAGATTAATGAAGATCCTAAAGATGCCTTGCTGAGAGAATTTCAGAAGGAGATTGAGAAACTCAGAGCCCAGTTGGCAGAAGAGGGTGAGGGAGGTGGAAGTGAGGAGAGTGGATCTGAGGAAGAGGTTGTAGAAGAAGGAGTAACAGTTAAGAGAAAGAAAAAACACAGAAAGAAGAGCTTACATGCTCTCCCACCTGAGAAAGTTGCCGAACTAAAAGCCAAGATTGCAGCGGAAAGGGAACAGCTGCAGCAGAAAACAGACATGGCAGAGGAAGAGAGAGACAAAGCTGCTGCTGAGTTGGAGAAAAGAGAAAAAGATATCAAGGATTCAGAGCTAGAACACCAAAGACTTCAAGATAAATTGAAAGCTGTGGAAAGCAAGATCATTGTGGGAGGAGTGAATTTGCTGGAAAAAGCCAAAGAGCAGGAACTATTGTTGGAACAATCTGCAAAAGAACTTTCTGTGAGGCAGGATAGAGAAAGAGAACTAGAGAAACTTATTGCGGAAAAAGAGCAAGAGAGAATCAATATTGAGGAGAAGTATGCAAGTCTACAGGAAGAAGCTGCAGGAAAAACAAAAAAATTGAAGAAGGTCTGGAGCATGCTCATGAGTGCCAAGTCAGAGATGGCAGACCAAGAAGAGGAGCACCAACGGGAAACAGAAGGCTTACTGGACATTATCAGAGAACTACGCAAGGAACTATTGCTTGACACTTTACTGATTGACAGCTTTATTCCTCCTGAATTCCAGGAGCGCATTGAGCAGCATGTGTCATGGAATGAGGAAATTGGAGAATGGCAGCTGAAATTTGTGGCTTACACTGGAAACCACATGAGGAAGGTTACTCCCACCCCAGATCCCAAGGATAAAAACAAGGAGCTTAATGAGACAGATATATCTGATGTTTATTTGAGCTATAATCAAATAAACCACTCCATGGGTTATGATGAACCAACTCCATCACGACCAAAGAGCAGCAGACCGAAGTCATCAAGACCAAAGACAGCTGGGAGACCCAAGACTGGAAAGAAGAAAAAAGGAGAAAGTGAAGATACAGCCAACAAAAGTAAAGAGGATGATGCTGAAAAATATCCACAGTCTAGGAGACTGCTGAGCCCAAAGAAACATTTTGCCTAA

Transcript

alor_g4774.t1

Protein

Uniprot

Uniprot term	Description
Q9Y496	Kinesin-like protein KIF3A OS=Homo sapiens OX=9606 GN=KIF3A PE=1 SV=4
Q4R628	Kinesin-like protein KIF3A OS=Macaca fascicularis OX=9541 GN=KIF3A PE=2 SV=1
Q5R4H3	Kinesin-like protein KIF3A OS=Pongo abelii OX=9601 GN=KIF3A PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027640	Family	Kinesin-like protein	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000278	Biological Process	mitotic cell cycle	Interproscan
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10394	KIF3A; kinesin family member 3A	-	Cytoskeleton proteins	ko04812	deepkoala