Gene detail

Detailed information of alor_g5095.t1 in Acropora loripes

Genomic Location: Acropora_loripes_110:621099...629595
NR annotation: XP_015771466.1, PREDICTED: uncharacterized protein LOC107349793 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

alor_g5095.t1

ATGGATGGTTCCATAGAAATCAAATCTTTGGAGAGTTCCGATTCTGACAGTGATTTAGAACGCGTTCCTTGGTCAACTGATGTGCGGCAGGATGTAGAGGAAGTGATAAACATTCTTAGTTCTTCCTCACTGGAGAATACTCCGGTCAAAGACAAGGAAAACAATAGCCATGTTCGGGGTGCTGTAAATACGTCTGTGAAAAAACTGTGGTCATCTGACAATGACACTGATGAGGAAGAAGTTGTTGGAGAATCCCCCTTTAAAAATGATGATCCACCAAGTGACCCGGATGAGGTCGACTTTTGTGGCTCTTCACCCATCTTTATCAGAGGACAAACAGCCAGCTTTGCAGCAGAAAAAATAATCAAGATCCTCGGTAAAGATCACAAAGAAAGCGTTTTGTGCAAGCATCAGCCTTGTAGAGTACAAATTAACGCATCGTTTCTTGTTGATCTACGATTCGTACCACTGAACGACTTACAAGCTGACGATAATGGCTCGTACGAACATATTGGATCCCCGACGGAGACTTTTCGCCTCCGTTTTGAGAGCAGTGTCTTAAAGGACTGTAGCCGCATTTCTAGGAAGAAAATGATAGGAACAAATCATTACTTCCTAACAAGAAAATACCACAAGTGTGCCTCTTCGCCAGACTTAAAGAGAACAATCTCTTACTGCACCACACCTAGTGGGGATATTCTGGGGAACATCGCTCTTATTCAATACAACTTTGCTAAGCAAGAGCATGCATTTGCTGTAAAATCACACGGAAATGCCAAGAAGAACAAAGTGCCATACACAAGAACCCAAGACTCGACGAAAACCTTGTTAAGGTCTAATCTTGCCAAAACCACACCCAAAGAGGCATGCCAAAAAACTACAAGAGATCTGGGAGGAACTTTAAATGTAAGGAGCGCAGGTTGCATGCCAAGAAACAGGAAACAAGCTTACAATATGAAGCAGATGAACGCTGGTGTCTCCCAAGAATCACAATATAAGGACGTCCTGGGGAGTCTCTTAACAATGGCCAACGACGAGAAATGGAGCGATTCCCAACATACCTTTATCAGAAGTATCCAGACGCACCCAAACCCTCTATTTCTGGTATTGGGGACGATAACGCAGTTCCAGAATCTCAAAGCATACTGCACCTCAGAATTGGTATCAAGTGTATTAACCGTAGATCCTACTTTTAACATTGGCAAGTACAGTGTAACACCAATTACACATCAAGACCTTCTGCTGGTGTCTAAACGAACTGGTGAACACCCGATCTGTATTGGCCCCATTCTTATCAGTCAAAACCTGACCAAAGATGTGTATGCAGATTTTGTGTATTGCATTCAGAAAAACTGTCCAGGTCTCAAAGACGAATTGAGGGCATTTGGAACTGATGGAGAGAAACCCCTTGAGCAGTCCCTCTCAGAGGGATTTCCATTTGCTATAAAGCTGAGATGTATGAGCCATTTCAGGAACAATGTTAAAGAACATCTGAAATTCCTTGACGAGTCTAACAAGACTCAAATCGCAAACCAGATTTTTGGCTATCACACTGTAGACGGGATATACAATGAAGGAATGGTCGATGCTGACGCGCCCGAAATGTTTGACTCCCTGTATGAATCTGTGCGACAGGATTGGGAGAAGAAGTGCCCTACCTTTGTCCGTTGGTTTGACACAACAACATCAATGATCAAACAAGAGATGCTTGCAAACGTAAGAACATCTGCCGGGCTAGGCTACCCTCCCAAGAGATTCTACACGCACAGCTCAGAGAGTACTAATCATGTCATCAAACACAAAGAGAACTACAAGGAAGTGTCCCTCCCAAAATTCGTGCAGGACATGAAACAGCTCAGAGCGGATTATGACGACGAGTTCGTGAAGGCCATAACAGGACGAGGAGAGTACACAATGAAGTATACTCACTTAGCTGTCACTACAGATCAGTGGTTCAAAATGACAGTGAAGCAGAGAGATACATATGTCAGAAAGCTAAGAGCGATGACCATGGCTGAAGTGATGCAGGGCGACAGAAGCACCGTCGTTGATATTACCTCTTCTGGACCCCTATCTGCTTCCTGGGAAATTCTGCAAAGCCCTCTTGATGATGTTGTTTTGAGCAACATATGGGAGAAGGCTGCCAAGATTGTTACCTCCCCAGGAGCAATCCAACCTGCTCCTTTTTTCCCAAGCAAGCAAACAACTGAGAATACATTTCTAGTGGTCAGTGAAAGTGGTTATGAAAAGTTTCACACCGTTAAATGTAATGGCAGTGTCAACATTGTGGTCAAATGTTCTTGCCCAGGCTTCAAATCTCTTGGCATTTGTTCTCATGCTGTAGCCGTCTCTGAGAAACAAGGTGTTTTAACAAAATATCTTGCTGCTTTTAATAGAAGCACTAGTCTGAATATCACGTCGATTAACGTGGCAGGCAAGCAGGACCCCAACGTTGGGAGGAAGAAGAGCAATCCCCGTAAGCGCTTCAAGGGACCAATGCCAAAGGTAGAAACTGTTGTTAGCTGCAAAAACGTCTTTGGATTAAGTACTCCCAAACAACCACAATTAAGCATGCAACAGCATGACATGCCCAATGTTCAGTTTACAGCTTCTAAAGTCTGTGGTGTAAACAAGCAAACACCAGCAGATTCTCAGGATGATGCTTTGTATGGTGGCGCACGTGTCCAGCCTGAGGCATCAGTTCCATTGGCACAGTCTGGATGTGATGCTTCAAGATGTCTTCAGCCTGGAACTAATTCTTTTGACAGTGCATTTTCATTTCTGGCAGATCTTCTCAATGATGACCCCACATCAGTTAGTTTAGCAGAATTGCAGGACTAGGATGATGAAAGGGAAGAAGCTCTATTAAGTGGAGGACTTGATCTTATTGTAGTTCCAGGACTTGGCTTCACAAAGCATGGTCTTCGTCTGGGACGAGCTCCTTTTGAATTTGTGGCCAAAGTGATGTCAATTTCCTCTCAGGGTTACTACGATAATTACATCAAAAAGTGCATCGACAATTGTGAAAGGAAGCCATACTTAGTGGGTTTTGCTTTCAGCACTCAAATTTGTGATGACCTTCCAATTACAGAAAGAGACATGGTATTAGATCACGTGATATCATATGAACCCGATTAA

Transcript

alor_g5095.t1

Protein

Uniprot

Uniprot term	Description
P49914	5-formyltetrahydrofolate cyclo-ligase OS=Homo sapiens OX=9606 GN=MTHFS PE=1 SV=2
Q9D110	5-formyltetrahydrofolate cyclo-ligase OS=Mus musculus OX=10090 GN=Mthfs PE=2 SV=2
P80405	5-formyltetrahydrofolate cyclo-ligase OS=Oryctolagus cuniculus OX=9986 GN=MTHFS PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01812	5-FTHF_cyc-lig	5-formyltetrahydrofolate cyclo-ligase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002698	Family	5-formyltetrahydrofolate cyclo-ligase	Interproscan
IPR007527	Domain	Zinc finger, SWIM-type	Interproscan
IPR024185	Homologous_superfamily	5-formyltetrahydrofolate cyclo-ligase-like domain superfamily	Interproscan
IPR037171	Homologous_superfamily	NagB/RpiA transferase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23407	ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0009396	Biological Process	folic acid-containing compound biosynthetic process	Interproscan
GO:0030272	Molecular Function	5-formyltetrahydrofolate cyclo-ligase activity	Interproscan
GO:0035999	Biological Process	tetrahydrofolate interconversion	Interproscan