Genomic Location: Acropora_loripes_149:496318...506224
NR annotation: CAB4029238.1, HMG domain-containing 3, partial [Paramuricea clavata]
| CDS | ||||
| alor_g5396.t1 | ||||
| Transcript |
| alor_g5396.t1 |
| Protein |
| alor_g5396.t1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DUB|OTU|OTU |
| Ubiquitin Family | DUB|ULP|ULP |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00646 | F-box | F-box domain | Domain | Interproscan |
| PF02902 | Peptidase_C48 | Ulp1 protease family, C-terminal catalytic domain | Domain | Interproscan |
| PF02338 | OTU | OTU-like cysteine protease | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003323 | Domain | OTU domain | Interproscan |
| IPR036047 | Homologous_superfamily | F-box-like domain superfamily | Interproscan |
| IPR001810 | Domain | F-box domain | Interproscan |
| IPR039598 | Family | HMG domain-containing protein 3 | Interproscan |
| IPR038765 | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| IPR003653 | Domain | Ulp1 protease family, C-terminal catalytic domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR17609 | HMG DOMAIN-CONTAINING PROTEIN 3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0008234 | Molecular Function | cysteine-type peptidase activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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