Detailed information of alor_g5529.t1 in Acropora loripes

Genomic Location: Acropora_loripes_33:2220136...2243849
NR annotation: XP_029186684.2, LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8C5N3Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22 PE=1 SV=1
Q52KN9Pre-mRNA-splicing factor CWC22 homolog OS=Xenopus laevis OX=8355 GN=cwc22 PE=2 SV=1
Q9HCG8Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens OX=9606 GN=CWC22 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02847MA3MA3 domainRepeatInterproscan
PF07084Spot_14Thyroid hormone-inducible hepatic protein Spot 14FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003890DomainMIF4G-like, type 3Interproscan
IPR003891DomainInitiation factor eIF-4 gamma, MA3Interproscan
IPR053719Homologous_superfamilyLipogenesis and Microtubule Stabilization SuperfamilyInterproscan
IPR050781FamilyPre-mRNA-splicing factor CWC22Interproscan
IPR009786FamilySpot 14 familyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18034CELL CYCLE CONTROL PROTEIN CWF22-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

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