Genomic Location: Acropora_loripes_171:739446...745800
NR annotation: XP_029198379.2, quinone oxidoreductase-like [Acropora millepora]
Species Acropora loripes · all data for this species · gene families
| CDS |
| alor_g5813.t1 |
| Transcript |
| alor_g5813.t1 |
| Protein |
| alor_g5813.t1 |
| UniProt accession | Description |
|---|---|
| Q08257 | Quinone oxidoreductase OS=Homo sapiens OX=9606 GN=CRYZ PE=1 SV=1 |
| Q5R4S7 | Quinone oxidoreductase OS=Pongo abelii OX=9601 GN=CRYZ PE=2 SV=1 |
| Q6AYT0 | Quinone oxidoreductase OS=Rattus norvegicus OX=10116 GN=Cryz PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002649 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00107 all species → | ADH_zinc_N | Zinc-binding dehydrogenase | Domain | Interproscan |
| PF08240 all species → | ADH_N | Alcohol dehydrogenase GroES-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013149 all species → | Domain | Alcohol dehydrogenase-like, C-terminal | Interproscan |
| IPR011032 all species → | Homologous_superfamily | GroES-like superfamily | Interproscan |
| IPR036291 all species → | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR013154 all species → | Domain | Alcohol dehydrogenase-like, N-terminal | Interproscan |
| IPR020843 all species → | Domain | Polyketide synthase, enoylreductase domain | Interproscan |
| IPR002364 all species → | Conserved_site | Quinone oxidoreductase/zeta-crystallin, conserved site | Interproscan |
| IPR051603 all species → | Family | Zinc-Containing ADH Family: Quinone Oxidoreductase/CCCR | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44154 all species → | QUINONE OXIDOREDUCTASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016491 all species → | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0003730 all species → | Molecular Function | mRNA 3'-UTR binding | Interproscan |
| GO:0003960 all species → | Molecular Function | NADPH:quinone reductase activity | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0070402 all species → | Molecular Function | NADPH binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K00344 | qor, CRYZ; NADPH:quinone reductase | EC:1.6.5.5 | Enzymes with EC numbers | - | deepkoala |
Genes whose expression across the transcriptome samples of Acropora loripes tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Acropora loripes, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
