Gene detail

Detailed information of alor_g6246.t1 in Acropora loripes

Genomic Location: Acropora_loripes_191:154806...159306
NR annotation: XP_029202153.2, uncharacterized protein LOC114966451 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

alor_g6246.t1

ATGCTCGGGTTCACTCGCGGTCGAGCGAGAACTGGGTTTAAGATTCACCTCACAGACGCTATGGCAGCAGAAAATGATGGTGAAGGCGACGTGTTGGCAATTTCATCCCCTCGGATACTATTCGTTCGACTAAGAAAGGATAAATCGAAAGACGCCATTGAAGATGAAATATTTAAGTGCATCAACAAAGCGTTGGAAGAATCCGGGGAGAATAAAAGCTTTCCTGAGGAACCTAAAAACTGCATTACGTTGCCTGATTTCGCCGGATGTCGAATACTGCAAGTGGCGGTGGGACCCGAATATGTGGGGATTTTGTTGGACGATGGACGTGTTGGAAGATTTAAATGTGTGACGAAAAACCTTGATTCTACCAAGAAACTTTGGAAGCCTGATCAATGCACAAGTGAACCGAGTTTTCAAGTTCAAAGCGACGAGGTCTTTGCTAGACAACTTCAAAGCGAATTTTTGAATAATGGTGCGATCACCAGTACTTCTTCAGGGAGACCAAATTCGTTGACTTCAAACAGGGGCACCCCCAGCTTGTCCTCTAGAATTTACACTAGTAACGGACGTGTTTCTGATCGCCCAGTGCAGAGTCCTATTCCGTCTGGTTCGTCTTACTCTAGCAATGCAAGTAGGAACACCTTAGTTACACGTGAATCTCAGACGGAAAGTGGTTACATGGAAGCGCTTTCCGGAAACGGTCTGTCGCTCGATGACAGTCAAACTTTTGTTGGTCAGGCGGATACGATTGTACAGTCAAAGAGCATGACGAAAAGTTCAGAATCAGACGAAAACACCACTATAGTGAAACATACTTCATTACCATCAACTTCAAATGGAATATCAACCAACCAAGAAAAATCGAAAGTGCAAGATAATATTAATCAGAAACTAGAAAATTCTTCAGAAAATGTTCCAGTAAATGGTAGATCAGTGTCATCCTCATCGAGTTCCGTTGCACGGCGATCAGTTTCATCCCCAAGGCTGCTTCAGAGGACTGTCTTTGCGACAAATTACCCAATGATGAGGCAGATTCCTGCACCCTTTTTGTTTCCAGCGGGCAGTGTCTCATTCCCATTCTATTCAAATTCTGCTAGTGGGCCAATGTTTGGTCCCCGAGGATCTTTGCGCCTTGAGCCTCGTGTTGTGAGAGCTCAACTGGCTGAGGCAGGGGTGTTTCCAGTTAGGGGATCTCGAACTTCTGCGACACAAGGACGTGAAGAAAGACCTTCAACCGACAACAAAACTGCAAGCTGTACATGTAATGATGCAGACTTTTGCTTCCCAGAAGTTGGCAATGTACAGTGGATAGAATTAGAAAATGTGGATGACGTGGAGGGTGGAGATGTTGTTTTCTCACATATTTCTGCTATGCACTCTGAGTTTTTATTGGTTGAAAAAGGAACTGGGGTCCTTTACCACTGGCCATATTCCACTGATGTTGCTTGTGACATTGCTACAGAGATTTCACTATCCCAAGATACTATGTACCTGCCGTTGGCAAAGCCTCATCCCCTGGGAGAGGCTCTGGGTCTGGACTCTGAGAAAGTTAGTCTTTTATCGTCTTCTAGAGTGCGATGTTCAGTTGTCACAGAAACTGGAAAGATTTGCACATTTTATGACAAACTTTTGAGAGAGTCCAACTGTGGGAATCCACCTGCTCTTATACAGGAACTCGCTCATCCTGCGATATCATTTGCTGAACTCAAAGGAGAAACAATTCTCTCAATCAGTTGCAGCGAGTTCTTTACTAGTGTAATGACTCAGTCTGGTAAAGTCTTGTGGTGGGGGCTGTTACCAGCAGAAGAAAGGCAAAACTTTAAACAGAAATTGAGCAAAGCAACCAATGAATCCAGTCACATAACTGTCAACGAAAAGGTTCAACTGCGTCAGCATTTTCCTGGTTTTCCTGGTGCTCTGGTGTACAAATGCTGTGATATAAGAGGACCCTTGATTGGTCGTTTGATTTGCCATGAGTCACCAGAAGGAACTAGCACAGTTGTAACAAAAATTAAAGTCGAGCCTCTAAATACCAAGACTAATGCCTTATCAGCCTCAACCTCCAGCAAGGAACAAGAAATTGAAGGTGTTCAGAAGGGACGATCAGTGGAAGATGAATTGATGTTCAGTCAGAAAGATATTGGAGGATCTTCCAGCCCTCACACAAGTGTAAGAAGGAAAGCCCAGATCTCTAGCAAACCAACTAATGGCTCAGAAATATGGGAGGTTAAGGATGTTGTTTTCCTTGAAAGTGAGAACAAACTGTTGGGGACAGTGGCTGCAATAGATGGCCCTCATGTTATTGTTAAAGTGACAAGTTTATTGTCACCCTCAAAGTCATCCTTACGCGTTTTCAAAGTCTCAGAATTGGAAGCTGTACCTAGTGAAGGTGAAAGTTTAGAGGGAACGTCTGTGGCTCAGCCGTTCCCAAGAAGTTCACTTTACCGAGGATGCATTCAACATTCCCCAAAGATAATTTTTGGAAAATCATCTACACAAGCTGATAAAGACCTGCTCTCTGGATTGAAGCCTTTAGCTCTTGCCACGACATCAGTAGGAATTTCCTTACTTGCACAGCGCATTTCTGACAGCAAAGCTTTTTTTTGGGACCAGCACTGGAGCAAAACATGGACAGCAGCAAAGTATACACTTGTAGTAGTGATGTGA

Transcript

alor_g6246.t1

Protein

Uniprot

Uniprot term	Description
P51592	E3 ubiquitin-protein ligase hyd OS=Drosophila melanogaster OX=7227 GN=hyd PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR009091	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46276	E3 UBIQUITIN-PROTEIN LIGASE UBR5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0034450	Molecular Function	ubiquitin-ubiquitin ligase activity	Interproscan
GO:0090263	Biological Process	positive regulation of canonical Wnt signaling pathway	Interproscan