Detailed information of alor_g6441.t1 in Acropora loripes

Genomic Location: Acropora_loripes_90:1317672...1344865
NR annotation: XP_029207938.2, FYVE and coiled-coil domain-containing protein 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9BQS8FYVE and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=FYCO1 PE=1 SV=3
Q8VDC1FYVE and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Fyco1 PE=1 SV=1
P23588Eukaryotic translation initiation factor 4B OS=Homo sapiens OX=9606 GN=EIF4B PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02759RUNRUN domainFamilyInterproscan
PF01363FYVEFYVE zinc fingerDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR004012DomainRUN domainInterproscan
IPR009038DomainGOLD domainInterproscan
IPR000306DomainFYVE zinc fingerInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR037213Homologous_superfamilyRUN domain superfamilyInterproscan
IPR047337DomainFYCO1, FYVE domainInterproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR033107DomainEukaryotic translation initiation factor 4B, RNA recognition motifInterproscan
IPR036598Homologous_superfamilyGOLD domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46753FYVE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan
GO:0005776Cellular ComponentautophagosomeInterproscan
GO:0072383Biological Processplus-end-directed vesicle transport along microtubuleInterproscan
GO:1901098Biological Processpositive regulation of autophagosome maturationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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