Gene detail

Detailed information of alor_g6850.t1 in Acropora loripes

Genomic Location: Acropora_loripes_9:5494389...5503036
NR annotation: XP_044181862.1, LOW QUALITY PROTEIN: dynein regulatory complex protein 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

alor_g6850.t1

ATGAATTCCCACGAAGATGAAGAGGACGAAGGTCCATCTGTGGATTCAGCTGTTGCAGAGGAACGGATTGCAGCGAGAAGAATTCGCATTCAAAGACGTTTGGAAGCAGCAAAGAGAGAGGCGAGTGGTGAAGATGCTACAAAGAAGAAGCCTGTAGACTCTGAAAAGGATGCACTTAAAAGTCGAAAACAAATGGAGGATAGTCGACATCGGCTGGTTAAGTTGAAATCCGATGGCACAGAACTTGTGACCAATGTCCACGTTGCTGCAGATGCAAGAGAGTCAATGAGAAGATTGGAGGAAGAGGATCAAAGAAGACAAAGGAATGAGAAGCTGGAAGCAGAAGCAAAGTCTGCCATTGAGAAGTTTGAGGAAATAACAAAAAAATGGGAATATGCACTCTTGAAAGAAATACCACAAGACCTTAATTCTATGCTGATGGAACAAAAAGCAGCCTGTGATAACATGATAGATGAGAAAAACAAGCTAATTCATGATTTTCAACAGGAACTGAAGTCTAAGGATGATCAGTATGTGAAGGATCTCAAGAAGGCAGCTGAAGATGTTGATCTTATGGTGGAAAGAATGGATGAGCAAATGAAACAGTTAACAAAAGCTTTCAGAGAAGAACTTACCCAGATTGAGAAAGCATTTGTGACTGAAAGAGCTGATTTAATTGAAAGCAACAGAAAGAAATGGGAGACGGCCCTGCAGCAGAGGCGAGACAAAGAGGTTGAATACATGGAATCTCGCAGGAAGAGAGTGGAGGACTATGAAAATCAGTTGCAAACACTAAGGGTACAAGATGCCGAGGAGTACAACATGGTTAAGATCAAACTGGAGACAGATGTGCAGATTTTGGAACAGCAGTTGCAACAGATGAAGGCCACCTATCAGCTAAACCAAGAGAAACTTGAATACAACTTCCAGGATGTCCTAAATAATCTAAAACAGAAGTTAGCCAAACAAGAGAAGCAATACAAGGAAGATAACCAGGCTCTCACTGATGATTATAAGCGAATCACAGAGCAGTTTAGAGAACTGCAAAAAAAGTCTAGACATTTTCAGACAATGGATCAGAAGAAGTTCCAGGACATCTGGTCCATGAATGAGGAACAAGTCAAAGAGCTAGTGCACAATGTGATGGAAGAGGATAGAATTATCCACGAGCAACAACTAGGGTTACCATGGCAACCTCCTGACCTAACATTTATGGACGACACAAGACCTGAGGAAACAACAGTAAAACCAAAAGAAAAGCAGATGTCTGCTACACAGGTGGCTCATGAGATAATGTCTGCTGGTGGAACAGATGATGGCGAGGATGACATGGAGGAAGGCTCAGTTGGCAGAGAGGTGCAGCAGGATGGCAAGAATGCAGGACGTAAATTATCAGCTAAAACCATCAAAGCCATATTGGAGCTGATCTGTGACGAAGCAGGGTTTCTCGTGGAATCCAAACTAACCAAGCTTCTGGCTCCTCTTGAAAGAGATGAACAGTCCTTAATGAAACTGGATGCTATCTTTGCAGCCCTTGGTATAGACACAGAAGAAGACATCTACCTTCTATCAAACTACTTTCTCAACAGAGGACAGAGACTAAAGGATGAAGAACAGCTAGCAAAAGAAAGTAGCATGAGAGAAGGGAAAGATGAAGATGAGAAAGAACGCAAAGAGGACACAGGAGCCTTACCTGAGGAAGGAGACAAGAAGGATGACGACAGCTCCGTGGACATGAGCATAGATGAGAAAGAGAGTCAGTCTTCTTCAGTGAAAGCACATTTATCAGAAATGATGCAACTTATTCATCCAAATGAGGTTGTGAAGGCATTGAGACAATTTGCGCAAGATAATTGCCAACCTCAAAAGGAATCCAAGAAACAAAGCATAAAGTTAGCCACTGGAACTGGAAGAGAAGCAATACTTGACGAAAGCTTTTGGCCAAAGATGTCCTCAGTTATTGATGTAAAGAAAGAGCGAGTTTGGTCAGCCTTGTTAGATGGATTTGAGAAATACCTTTCAGTTTTGACAGAAAGGGCATCATTAATACAGGAAACAGATGCATTGCGGCAACAGAATGCAGAGTTGAGGATGTTGCTTCATCAATATGTGAACTCCAGGGTGAATGCAGAACTGGAGATTCCACCCACAAGGATATTGCAAGCAGAGCTATCCAAAGACCATGAATGA

Transcript

alor_g6850.t1

Protein

Uniprot

Uniprot term	Description
Q7T0Y4	Dynein regulatory complex protein 1 OS=Xenopus laevis OX=8355 GN=drc1 PE=2 SV=1
Q5XI65	Dynein regulatory complex protein 1 OS=Rattus norvegicus OX=10116 GN=Drc1 PE=2 SV=1
Q96MC2	Dynein regulatory complex protein 1 OS=Homo sapiens OX=9606 GN=DRC1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14775	NYD-SP28_assoc	Sperm tail C-terminal domain	Domain	Interproscan
PF14772	NYD-SP28	Sperm tail	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029440	Domain	Dynein regulatory complex protein 1, C-terminal	Interproscan
IPR039750	Family	Dynein regulatory complex protein	Interproscan
IPR039505	Domain	Dynein regulatory complex protein 1/2, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21625	NYD-SP28 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003352	Biological Process	regulation of cilium movement	Interproscan
GO:0005858	Cellular Component	axonemal dynein complex	Interproscan
GO:0005930	Cellular Component	axoneme	Interproscan
GO:0060285	Biological Process	cilium-dependent cell motility	Interproscan
GO:0070286	Biological Process	axonemal dynein complex assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19754	DRC1; dynein regulatry complex protein 1	-	Cytoskeleton proteins	ko04812	deepkoala