Gene detail

Detailed information of alor_g7207.t1 in Acropora loripes

Genomic Location: Acropora_loripes_55:2055335...2059520
NR annotation: XP_044180683.1, A disintegrin and metalloproteinase with thrombospondin motifs 16-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q6ZMP0	Thrombospondin type-1 domain-containing protein 4 OS=Homo sapiens OX=9606 GN=THSD4 PE=1 SV=2
Q3UTY6	Thrombospondin type-1 domain-containing protein 4 OS=Mus musculus OX=10090 GN=Thsd4 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19030	TSP1_ADAMTS	Thrombospondin type 1 domain	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR050439	Family	ADAMTS and ADAMTS-like	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13723	ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan