Genomic Location: Acropora_loripes_79:1406675...1437422
NR annotation: XP_029195092.2, FACT complex subunit SPT16-like isoform X2 [Acropora millepora]
| CDS | |||||
| alor_g7371.t1 | |||||
| Transcript |
| alor_g7371.t1 |
| Protein |
| alor_g7371.t1 |
| Uniprot term | Description |
|---|---|
| Q9Y5B9 | FACT complex subunit SPT16 OS=Homo sapiens OX=9606 GN=SUPT16H PE=1 SV=1 |
| Q920B9 | FACT complex subunit SPT16 OS=Mus musculus OX=10090 GN=Supt16h PE=1 SV=2 |
| Q9W603 | FACT complex subunit SPT16 OS=Xenopus laevis OX=8355 GN=supt16h PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08644 | SPT16 | FACT complex subunit (SPT16/CDC68) | Domain | Interproscan |
| PF14826 | FACT-Spt16_Nlob | FACT complex subunit SPT16 N-terminal lobe domain | Domain | Interproscan |
| PF00557 | Peptidase_M24 | Metallopeptidase family M24 | Domain | Interproscan |
| PF21091 | SPT16_C | FACT complex subunit SPT16, C-terminal domain | Domain | Interproscan |
| PF08512 | Rttp106-like_middle | Histone chaperone Rttp106-like, middle domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013953 | Domain | FACT complex subunit Spt16 domain | Interproscan |
| IPR033825 | Domain | FACT complex subunit Spt16, peptidase M24-like domain | Interproscan |
| IPR029148 | Domain | FACT complex subunit Spt16, N-terminal lobe domain | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR000994 | Domain | Peptidase M24 | Interproscan |
| IPR029149 | Homologous_superfamily | Creatinase/Aminopeptidase P/Spt16, N-terminal | Interproscan |
| IPR048969 | Domain | FACT complex subunit SPT16, C-terminal domain | Interproscan |
| IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR013719 | Domain | Histone chaperone RTT106/FACT complex subunit SPT16-like, middle domain | Interproscan |
| IPR036005 | Homologous_superfamily | Creatinase/aminopeptidase-like | Interproscan |
| IPR040258 | Family | FACT complex subunit Spt16 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13980 | CDC68 RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006368 | Biological Process | transcription elongation by RNA polymerase II | Interproscan |
| GO:0031491 | Molecular Function | nucleosome binding | Interproscan |
| GO:0035101 | Cellular Component | FACT complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K25639 | SUPT16H, SPT16; FACT complex subunit SPT16 | - | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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