Detailed information of alor_g9005.t1 in Acropora loripes

Genomic Location: Acropora_loripes_5:2877891...2908507
NR annotation: XP_015754748.1, PREDICTED: DNA mismatch repair protein Msh3-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P20585DNA mismatch repair protein Msh3 OS=Homo sapiens OX=9606 GN=MSH3 PE=1 SV=4
P13705DNA mismatch repair protein Msh3 OS=Mus musculus OX=10090 GN=Msh3 PE=2 SV=3
Q2UT70DNA mismatch repair protein msh3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=msh3 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01624MutS_IMutS domain IDomainInterproscan
PF05960DUF885Bacterial protein of unknown function (DUF885)FamilyInterproscan
PF05188MutS_IIMutS domain IIDomainInterproscan
PF05192MutS_IIIMutS domain IIIDomainInterproscan
PF00488MutS_VMutS domain VDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007695DomainDNA mismatch repair protein MutS-like, N-terminalInterproscan
IPR036678Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR016151Homologous_superfamilyDNA mismatch repair protein MutS, N-terminalInterproscan
IPR010281FamilyProtein of unknown function DUF885Interproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR007860DomainDNA mismatch repair protein MutS, connector domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33361GLR0591 PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan

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