Gene detail

Detailed information of alor_g9342.t1 in Acropora loripes

Genomic Location: Acropora_loripes_5:8052901...8055189
NR annotation: XP_015762216.1, PREDICTED: uncharacterized protein LOC107341324 isoform X2 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

alor_g9342.t1

ATGGATGGCTACCTTACTGGAGAGGTTCTCCTGCCGTTGGATAGAGAGGCATCCACAGGCATTGATGACAACATTGTCAATAAAAAAATGCGTCAGACATTGAAACAGTTCGCAGAACTCAAAGCTGCAAATGAAGACCACAACGAAGTGAAATTCTTCGCCACAGAACAAAGTCTTTCTGACACTTTCACTGGAAACCGTGGAGTCTTTATCCATTTGTATGAAGATGGCGATCTAGATAATGAAGATTTTAAGTTATCACCAAAGCCAGAGAAACTAGAAGCAGCGAGCGTGCGAGATGATTCTATCGAGCTTCAGTGGAATGATCCGCACGGGAGCGAAAACAACATCAAAAAGTACAAAGTTCAGTACAGAAAAGCTGAAGATGCGAGCCTCGACTGGATCACTCAGTACTCAGTTTGTGGTGACGAAGCTAAGCAAACGGCTACTGTATCTGGGCTTTACCCCGCTACCAGGTACTTGTTCCGGGTATGCGCTGTGGGACAGATTGTGGTCAGCCAATACAGTGATACTTTGACTGAAACTACCAAACCAACGAGTCCGCCTGGCAAGCCATCCTTTGTAGCTGCAACGACTGACACAATTACTGTTGCATTTGCGAGACCCAAAAATATTGGAGAGAGAGTTAAGATTGAAAAATACAAGATTGAGTGGAGCACCAATTCCCAACATATGGAGCAAGTCCTGCAGCACACAGAAGACGCGTCGCCCACTTGCACAATCGAAGGTCTTCAAGCAGAAGTACCTTACAAATTTAGAGTTATCGCGATTTGTGGCAGAGAAGGAGACAGTGCGCCCAGTGACCTCAGTGATTCATTGCAAACTACGCTATCCCCCCAAAAATTTGTTACAAGCAGGATTCTTACCCACTGTACCCTAGTTCAACCACCAGAGGATGGAAAGCCAGCAGTATACAGTCTTCCTCTAATTCTCACTTACGAAGACAGCTGCAGTCAACTGCGAAAGTTTGTCGTTAATTTTGTTGAGGAAAGGACGCAGCTGCCTGGTAAATGTGACTCCGTTCATGAGAAAGTAATTATGGTGGTTGGGTCAACGGGCTTTGGGAAGACAACCACAGTTAATGCCATGATCAACCACGTCCTGGGAGTGCAGTGGAAGGACGACTTTCGTTTCAAGATGATCCACGAAAGTTCTAGTAACCAAGGGGCGGAAACGATCGGAAATCAAGCAAACAGTCGCACCCAGTTCGTATCGTGTTACACTCTACCGTACATGGAAGGATTCAAAGTACCTTACAACCTCACTATTGTAGACACACCTGGCTTTGGAGATACAAGAGGAATTGAACATGACAAAGTGATAACCGAACAGATCCGCAGATTCTTTAAAACAAAGGGCTCAGCAGGCATTGATCACGTTGATGCCATCTGCTTCGTGGCTCAAGCTGGCAATCCGAGGCTCTCTCCAAAGCAACAGTATGTTTTTGACAGAATCCTGGCCATGTTTGGAAAAGATATCAAGAAGAACATCTTAGTGCTCTTTACCTTTGCTGATGGTCAAAAGCCTCAAGCTCTGTCGGCATTGCAAGCAACCGGAATCCTAGAGGACGGTAATAACTTCTTCAAGTTTAACAACAGCGCCCTATTTGTAGCTAACTCTGGTGAAGATGACGAAGGCAACTTCGACAGAATGTTTTGGAGAATGGGAATCAAGAGTTTCGAGAAGTTCTTTCAAGGCTTGGCCCAGATGGAACCAAAAAGTCTTGTCCTCACCAAGCAGGTGTTGGACGAAAGAGCTCAGCTGGAAGATCGATTCAGTGCTTTGAAGGGGAAGATTGCCCTTGGAGCCATGGAGCTGGGTCGACTGATGATGTTAAAGAGTATAAACGATGACATGGAAGCTTTCGCGAATAGCTGGTACTATTCAGCGTATTTAGACCATTTCTCTGGGAGAAACATAGAGGCTGAGTTGAGGAAAGCAGAAGGTGGATTCAATCAAACCAATCTCATTGTGTTGAGCTTTGTCGCCGAATTGCAACGTGGTCTGAAGAAGCTGTCAGAGATTGCCCTCAAAAAAGATCCACTACAACAAGTAGACTACTTGGATATGCTCATAGATTCTGAGAAATCAGAATCAAGACCTGGCTGGCAAGATCGTGTAAAATCGTTGCAGGAAACAAGGGATGAAGCAGTGCAAGTCAATCGTCTTGGAAAGCCTGGATATGACCCATGGGAAAATTATCGAGAGAAGGAGGAAACTCGTTGGTTCTTTCAGAAGCAAACTGAAGAGGTTCAAGACGGATGCTGA

Transcript

alor_g9342.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF18078	Thioredoxin_11	Thioredoxin-like SNTX domain	Domain	Interproscan
PF04548	AIG1	AIG1 family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR040581	Domain	SNTX, thioredoxin-like domain	Interproscan
IPR006703	Domain	AIG1-type guanine nucleotide-binding (G) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32046	G DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan