Gene detail

Detailed information of alor_g9461.t1 in Acropora loripes

Genomic Location: Acropora_loripes_5:9404663...9421469
NR annotation: XP_044182462.1, protein kintoun-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

alor_g9461.t1

ATGTCGCAAACTAAGAATGATAAAGACTTCAAAATGACCAAAGAGGAGCTGGATAAATTTGAGAAAGCTATGAAGGATGAAGAGTTTCGAAAACTGTTGGTTGAATATGCCAAAGAGATATCAGACCCAGAAAACAAGAAGAAATATGAAGAAGAAATAACACAGATGGAAAAAATGCGAGGCATGGATGTCAAATTTGTGAATCCAGTGGATGGCTATGTGGTGAAGACAACTGACAGTAGCACAGGAGTCAAAGCATTTATCAACATTTGTTCCAATCACCATATTGCAAAGGCTTGGTCACAGTTTGCCGAGAGAGAGGAGAACAGAAAGAAAAAATCTGGACATCAATGGAATATTCCCTATAGCTTATCAACCCCCAGAGATGACATTGATAGAGCGGGAAAGAAGTGTGTTGTGTACGATGCTGTGTTTCACCCTGATACTTACAGCAAAGGACAAGAGGACAAAAGATTTAAACAGTTGATGATCGATACAGCCATTGATGGAATACACAGAGAATTCAAAGCAACATTAGACAGGAAAATCGACGAGGAGCATGGCTGTGCGAAGTTTGATAAAAGCAAACGGCGGTTGATCGTCACTTTGCCTGTCTTACGACCACCGATGTCAAACTTTCAGGAACGAACGGAGTCATTTGACATAGAAGATCAAGGTGAAGTCGTAGCAGAAGTGGACGTTTCACAGAGTAACGTTGAGTCGTCGCCAAAGGAGAAGGACAATTTTTCGGCAAATCTGGAACAAAAGATGGATACGTCTGGTGCAGCAGACACTGGCATTGAAAATAAACGCGAAGGTGAAATGGAAAGAGGAACGATAGATGACTTGGATATTCGCTTCAAGATTCCACAGAACTCCTTGGATCTTTCCGCGCCCTGTTTCTTCACTTGTCCGCCTTACACCTATCATCAAGACGATGACGTAATCATATTCGTCATCAAGGTTCCAAACATCGCCCTGGACACCGTCTCTCTCGGTTTTAACAAGAACAAGGCCTGTATCACTTTTCCATCCGGAACCTCAAAGCCTGGAGAGCTGCCTCCCCCGGATTTTTCTCTATACATTCAGTTCCCGGATGATCATGAGCTCGACACAGAGCTCTGTAACATTGACGTCAGTGAGGAAAATCTCGTTTTGAGCTTGCGCAAACTCATCGCCTGCAAAGGCCTGTGGGATAGTTTTCAGGCTGGTTCTGGGGAAGAAAGTTTGGAGACAAAGTTCTTTATAACCGACAAGACGGTTGATTCTATGATGAGAGAAATCGCCGAGCAGGATCCCTGGGCATCACCAAACAATTTATCAAGCGTCAAAGTTGTGTCTGTCGCGGATGACTGCCTCACCCTTGAAGTAGAAGCCACGTGTAGAGAAGACGGGAACGTCGAGGAGTCGAACAACGAACACATGGGAGTGAACTTTACGTCCTGCGAAGAAACAGGCACGAAACAAGAGGAGGACGAACAGTGCGAAAATGAACTTGGCAGAAATAATGCCCAGTTTAACGGCGACTCAAACGGCGAAAAATCTCAAAATCGGGAGCAAGAATCCGCGAGTTCGGACCCTGAGGTTATAGAGGCTGTGACAGAAAAACGAGATGGTTTTGTTCCAATTGATGTCATTAATAACGCATTGAGAACTAGAAAATCAATACTAAGGCGGACATCCAGCGTCTCTACAGATGATTCCCTAGGGGACGAAAATGAATTTGACGGGACTCCGGAATCTCCGAGCACGAAAAATGTCCGCTTTAATCTGAATCCGAACGTTCGTGTATTCAGCAACAAAAAAGGAAAGGGTAAAAGGAAGTTGGAAGCAAAGCTTAGGGCCGAGGCTAGAAAATATTCTTTGGAAAGCGAAGGGAGCGGATCGGAACAGAGCTGCGGGACTTCACCCGCTGATTTAGGGACGGGATTTAACGGGTTGAGGGGTAGATCCCTTGATTCTCTCGATCTCAAAAAGGACGAAGCTTCGACCAAAGAAGAGAGGGATAATGAAGTGGACGAGGTTAATGGCGCCGGCAATCAAAATGAGAAATCAGCGGGTTCTGCAGCCAACGATGACGAATCGTTTGGTTTGACAAACAGTTTGATATTTGAATTGGATGACTGA

Transcript

alor_g9461.t1

Protein

Uniprot

Uniprot term	Description
B4LMK1	Protein kintoun OS=Drosophila virilis OX=7244 GN=Nop17l PE=3 SV=1
B4J4Y2	Protein kintoun OS=Drosophila grimshawi OX=7222 GN=Nop17l PE=3 SV=1
Q0P4V4	Protein kintoun OS=Xenopus tropicalis OX=8364 GN=dnaaf2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08190	PIH1	PIH1 N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008978	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR050734	Family	PIH1 family, Kintoun subfamily	Interproscan
IPR012981	Domain	PIH1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22997	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19751	DNAAF2, KTU, PF13; dynein axonemal assembly factor 2	-	Cytoskeleton proteins	ko04812	deepkoala