Gene detail

Detailed information of alvinactis_v1_g10077 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_5:2274579...2296636
NR annotation: XP_020902598.1, solute carrier family 22 member 15-like [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g10077

ATGGCAGCCATTTTGTGCAGTCGGCTTTGTGGCCGAAGTGCTACACGTTTTGTTTTTAGCTCAGTAAGACCGGTTTTAGCATCGTCTTCAGTGACATATTATCCGAAGATTCAGAATCAAAATGTTCTACTTACAAAAGCGATTCATTCCACATCTTCAAAGAACAAGACATCTCTAGAAATTGCTCCATCTACTGCCTCGACTCACTGGATTGCTGAGAGAGTATTCAGTATAGCATTATTGGGTCTTATACCAGCTGGGATATTTTGTCCCTGCGCTGCTGTGGACTGGGGACTAGCAATCTGTATCCCTATTCATAATCACTGGGGTATCCATGCAATACTGGCCGACTATGTCAACAAGGGACCTAATATTCCTGGTCGAGCAAGAGGCATATGGCTTGTTTTGACTGTCTTACAATTTATGGGTCTTTGTTACTTTAACATCAATGATGTTTTCCTGGGGATGGAGTTCGATCATGTCTTGAAAATCGTGGGTGAATTTGGACCCCATCAGAAACGCCTGTACGTTCTCTTATGTCTGTCTATAGTCCCTGCTGCTATACAACTTCTACTTCTTGTATTCATCGCGGCTGAACCAACATGGATTTGTCTCGACTCCTCGACGAACAATAGTAATACATGTCCTAAGAATATATCTCATTGCTCCGAGAGACAGTATACTTCAAAATTTACATCGATAATAACAGAGTGGGACCTCATATGTGAAGATGCATATAAAGCTGACCTTGTCCAATCTGTTGTCATGGCGGGTACCCTAGTGGGTGCTATGCTATTTGGTGCACTGGCCGATAGATATGGACGGCGTAAAATCTGGTACATTACTTTTTCTGGACTTGTCGCATTTGGATTTGCCAGTTCATTTGCACCAACATATAAAATGTTTGTAATTCTGAGATTCTTTACTGGACTGTGTATTGGTGGTGAGATTCTGTCAGCATTTGTACTGGCAACAGAACTTGTTGGGCCTTCATATCGTGGGTTTGCTGGAATTGTGGCTCAGTGTTTTTTTACCACAGGACTTCTTATTTTACCTATTGTGGCATATTTAATACGAGACTGGAGAACACTGACAGTTGTACTGTCCCTGCCAGCATCAGTTTTTATTTTATTTTTCAGATGTGTTCCAGAATCAGCACGCTGGTTAGTGATACGAGGAAGAGTATCGGAGGCAGAGGATATTTTACTAGATATGGCATTAAAGAATGGTATTGCAATACCCAAGAGTCTCATTCAAGTAAACAGACCTTTTCATATTGGATCTAGATATGGCTGTCTAGATTTGTTCTGTGGTCGACAAATCTTCAAAATTACTTCTATTTTGATATGTTTATGGTTTATCGATACTCTGGTTTATTATGGTTTATCACTGAATGCAAAGCACCTTGGAGGTGATATCTACATGAATTTCTTCCTGTACAGTTTAATGGAAATTCCTGCTTATCTTACATGTCTTTGCTTTATAAACTGGATTGGACGTCGTAAAAGTGTCTGTTATTATATGATTGCGGCTGGTTGTGCATGCCTTGGATGCTTATTCATTCAATCAAGCAGTAATACTGATGTCACCACAACCCTAACCACTGTATTTGCTATGATAGCAAAGTTTGGCATCTCAGCATCCTTTGCAGTGATTTATATTTACTCAGCTGAATTACTTCCAACTGTTGTTCGGAATGTCGGGATGGGTGTCTGTTCCATGTCATCACGGATTGCAGGAATCTGTGCACCTTTCATCGTTTACCTGGGTACGTACTCCAAGCCTTTGCCAATTGTTATATTTGGTATGTGTTCGTTCTCTGCTGGTCTATTATGCCTTGCTTTACCAGAGACTCTCAATAAGCCATTACCTGAGACGTTAGATGATACCACTGGCTTTGACAATCTGAGATCAGGGATTTCATACCAACAACTTGAAATGTCGCACTTGGCGTTTGTGCAGGACGAAGAGGTGTTTCAAGCCAATGACTCTGATTTTGATTACGACGATGAACTTGTGACAGAAAAAACAACGATCAGTGCATCGTTTGATGGTGGTTGTCACGGTGACTGGTACGGAATCTATGACATTAAAGTCAAAACTGGCTATGTAACGAATGCTGGCACTAATGCTAAAGTCTCTGTTACTATTTATGGTACAAATGGTACAAAACCAAAGACACAGCTCACAGCCAGCGGAATAGACCCCTTTGAACGCGGGAACACGAACGACTTTGCAATAAAAACAACATCAAACCTTGGAAATCTAACAAGCATCACaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggcgaggagaggagaggagaggagaggagaggagaggaaaggagaggagaggaaaggaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagagaggagaggagagaggagaggagaggagaggaaagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggagaggaTTTATTTATTTAAATGA

Transcript

alvinactis_v1_g10077

Protein

Uniprot

Uniprot term	Description
Q7ZX53	Solute carrier family 22 member 15-like OS=Xenopus laevis OX=8355 GN=slc22a15b PE=2 SV=1
Q28ES4	Solute carrier family 22 member 15-like OS=Xenopus tropicalis OX=8364 GN=slc22a15b PE=2 SV=1
Q504N2	Solute carrier family 22 member 15 OS=Mus musculus OX=10090 GN=Slc22a15 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05328	CybS	CybS, succinate dehydrogenase cytochrome B small subunit	Family	Interproscan
PF00083	Sugar_tr	Sugar (and other) transporter	Family	Interproscan
PF01477	PLAT	PLAT/LH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR005829	Conserved_site	Sugar transporter, conserved site	Interproscan
IPR005828	Family	Major facilitator, sugar transporter-like	Interproscan
IPR034804	Homologous_superfamily	Fumarate reductase/succinate dehydrogenase, transmembrane subunit	Interproscan
IPR001024	Domain	PLAT/LH2 domain	Interproscan
IPR036392	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24064	SOLUTE CARRIER FAMILY 22 MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan