Detailed information of alvinactis_v1_g10113 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_5:2725028...2754426
NR annotation: XP_031574007.1, coadhesin-like isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9W6R5Retinoschisin OS=Takifugu rubripes OX=31033 GN=xlrs1 PE=3 SV=1
Q28178Thrombospondin-1 OS=Bos taurus OX=9913 GN=THBS1 PE=2 SV=2
O15232Matrilin-3 OS=Homo sapiens OX=9606 GN=MATN3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR020635DomainTyrosine-protein kinase, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0004713Molecular Functionprotein tyrosine kinase activityInterproscan

TOP