Detailed information of alvinactis_v1_g10213 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_5:3896365...3922155
NR annotation: XP_031555517.1, cohesin subunit SA-2-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8WVM7Cohesin subunit SA-1 OS=Homo sapiens OX=9606 GN=STAG1 PE=1 SV=3
Q9D3E6Cohesin subunit SA-1 OS=Mus musculus OX=10090 GN=Stag1 PE=1 SV=3
Q8N3U4Cohesin subunit SA-2 OS=Homo sapiens OX=9606 GN=STAG2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08514STAGSTAG domain RepeatInterproscan
PF21581SCDStromalin conservative domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020839DomainStromalin conservative domainInterproscan
IPR039662FamilyCohesin subunit Scc3/SAInterproscan
IPR013721DomainSTAGInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11199STROMAL ANTIGENInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007062Biological Processsister chromatid cohesionInterproscan
GO:0008278Cellular Componentcohesin complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06671STAG1_2, SCC3, IRR1; cohesin complex subunit SA-1/2-Chromosome and associated proteinsko03036deepkoala

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