Detailed information of alvinactis_v1_g10390 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_5:6527284...6565358
NR annotation: PFX21960.1, Lysine-specific demethylase 6A [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O70546Lysine-specific demethylase 6A OS=Mus musculus OX=10090 GN=Kdm6a PE=1 SV=2
O15550Lysine-specific demethylase 6A OS=Homo sapiens OX=9606 GN=KDM6A PE=1 SV=2
P79457Histone demethylase UTY OS=Mus musculus OX=10090 GN=Uty PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00370FGGY_NFGGY family of carbohydrate kinases, N-terminal domainDomainInterproscan
PF02782FGGY_CFGGY family of carbohydrate kinases, C-terminal domainDomainInterproscan
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF21322KDM6_C-helLysine-specific demethylase 6/UTY, C-terminal helical domainDomainInterproscan
PF13431TPR_17Tetratricopeptide repeatRepeatInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR018484DomainCarbohydrate kinase FGGY, N-terminalInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR018485DomainCarbohydrate kinase FGGY, C-terminalInterproscan
IPR051630FamilyTranscriptional Corepressor and Histone DemethylaseInterproscan
IPR043129Homologous_superfamilyATPase, nucleotide binding domainInterproscan
IPR003347DomainJmjC domainInterproscan
IPR048562DomainLysine-specific demethylase 6A/B-like, C-terminal helical domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14017LYSINE-SPECIFIC DEMETHYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan

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