Gene detail

Detailed information of alvinactis_v1_g10392 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_5:6569475...6574769
NR annotation: XP_031554890.1, NF-kappa-B-activating protein-like [Actinia tenebrosa]
Species abbreviation AIDSS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8N5F7	NF-kappa-B-activating protein OS=Homo sapiens OX=9606 GN=NKAP PE=1 SV=1
Q9D0F4	NF-kappa-B-activating protein OS=Mus musculus OX=10090 GN=Nkap PE=2 SV=1
Q4V7C9	NF-kappa-B-activating protein OS=Rattus norvegicus OX=10116 GN=Nkap PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006080 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06047 all species →	Nkap_C	NF-kappa-B-activating protein C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040466 all species →	Family	NF-kappa-B-activating protein	Interproscan
IPR009269 all species →	Domain	NF-kappa-B-activating protein, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13087 all species →	NF-KAPPA B ACTIVATING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0010468 all species →	Biological Process	regulation of gene expression	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K25931	NKAP; NF-kappa-B-activating protein	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.