Gene detail

Detailed information of alvinactis_v1_g11364 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_5:22438830...22441655
NR annotation: CAB4030513.1, uncharacterized protein LOC110458063 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g11364

ATGAGTGAACCTACTGATTTAGAGCTTCAAGCCAAGTCCAGCGTTCCACGACAAAGAGTTATGACAACGAAAGGGAAAGAATACTACCTCGAAAGACTCAAGGTGAATTATCGATCTGCCAAAAGAACTTGGAGGTCGCAACTCAACGCCTTAGTATCCTCACTAGTCACCGATGCCGACATTTCTGCACTGAAACTTCAATGTTTAAAGCTAGAAAAGCACATGATTGATCTTTCCAAAGCACACGAAGGGTTGGATAAAGAATTAATCGTAGAAGAAGAAAAGATAGCCCTGGATGACGAACTAGATATGTTGACTAAAGAGAATATGGATCACTTAAAGATGGTTGATAACAGAATGAGAGAATTAGAAACGACTTATTCCAAGAAATCCTCCGGAGAAAGGTCAAATACAGTTGGATCCCAACGTTCTCGTTCTTCATCTTCTTATCAATCATCCTCCCGCAAGTCATCTAGTCATGCTTCATCTAGTCACAAGTCATCTCGCCACCAGGCGTCAGGACATCAGTCAAGTCGACATTCTTCAAGTCATGAATCATCTAGCCATCAATCGTCGTCAAACCACAAGTCATTGAGCCACGTTTCATCTAGTTACAAGTCAAGATCAGTTAAATCAAGCACCTGTTATAGAAAACAGCTTGATCTTCAAGGTCAGATAGCAGCGTTAAAAGCGAAGATAGATCTTTCAGTTGAAAAACGCGAAATGGAATCAATAGCCCAGAAGCAACTGGAAGATATACACAAGCAAAGATCAGAGCTCACTCTCACCGAAGGAAGGATTAAAGGAGATCTAAGGAGATATACGGATGGTTCCAAGACCAAGGAAGATTTGGTTCAAACCGAGGCGAAATTAAATGTATGCAATGGATTCATGCAAGACGACGTACATGTGCCTTCAATGACTGAAGATCAATTACCTCAAGGAGATGGTAGTAAGGACCAAATGCAGAAGTTTCTTGAGCAAGTTGAACTAGAGTACGTCAATCAATCTGGAAAGAAGAACTTTCATTCCATGCCTATTGCTAGTGGTTCTCTCTCTGTCAATCAACCAAGTTCCAATGCCCATAATCCTATCAACAAAGATGTAGACGCCCACGAAAGTGTAGACACTCATGGAACAAGCTCATCCACTAATAGTAACATCGTTACCACTCAACTGATAGAGatcgtcaagactttagtggaaaatcaaaactacagtaaattgccttctcctgaaccaggaatcttatctggggatttattacactacccaatctggatccaagcctttgaaacacttatcgagaacaagacaacgagaaccaacgaaagaatccacttcctgagaaagtacgtagctggagaagcaaaggaagcgatcgatggtctactgctcctaaattctgatgacgcttaccaaaaggctaaagaaatgctgtccaagcgtttcggagatccgtttgctatcgccagcgcctatcgtcaaaagcttgaatcttggcccaagatccaaaatagtgatgctaagggtcttcgcaagtttactgatttcttagcacattgtgagaaggctatggatggaattagcagtctacgagtcctcgacgacgatcaagaaaatcgtaaaatggcagcaaagcttcctaagtggattacaaatcgatgggccagagaagtctaccaatacaaagaagacagtgggaagttcccgtccttcaagaaatttgtaaaattcctgatcaaagaatctgatattgcaaacgacccagtcttctcagcacagaaccaagaactcccattgtccaagaaaccaaaggatacactaaaaccattcaaagtcgcaagtaccttctcagtaggaacacaaaaggaagacgaacatggtcaacaatgttgtctagtttgtaagtcttcgcacgacatcgatatctgtgaagaattcttaaataaaacagttcaagagagaaaggagttcgccatgatcaacagattatgcttcggatgtttaaaagaaggacatcgctctaaggactgcaaggaaagaaaaacctgtaaaaactgcaacagacttcacccaagctctcttcatggtgacgttaaaagggaaaccactaaagatgtcaaagcagataagtcaacggaaaccatcaaccaagcaacttctaattacaccaaagtaaagtttcacactgcaacctactcaatgattgtaccagtttggatataccataaagacgatccaggaaatgagagattaacttacgcactgctagacgatcaatcagatacgacatttgtgaaagaaaaacttcttgaagatcttggtgtcaagggtgaaagaactcaactttcattaaccacgcttcacgctgaaagtaagcttgttgatacttataaagtcaagggtctagctgttcgtgatctcaatcgccaagttaccatgatgcttccgagaacgtttacttgcttttccattccagctcaaagaaatcagatccctcgtccagaagcagcaaggcagtggactcacaccgaacgtattgcagaagaacttatgccgtatagagaagatatcgacgttggactacttatcggcctagattgtactcgcgccctcatccctcgtgaagtgattgcaggtgatggcaataatccctatgctttaaagacagatcttggctggggaataattggcaagtacaaagacgctgctagtgacaacgatgaggaagataatattggcgtctcacatcgtattatatcctgtgaagtgacgaatcctcaagcttcctgttacctttctcgcaggaccaaaacaaaataa

Transcript

alvinactis_v1_g11364

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR005312	Family	Protein of unknown function DUF1759	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan