Detailed information of alvinactis_v1_g12436 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_6:6372754...6383521
NR annotation: KXJ06869.1, Calcium-responsive transcription factor [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q80XJ3Tetratricopeptide repeat protein 28 OS=Mus musculus OX=10090 GN=Ttc28 PE=1 SV=3
Q96AY4Tetratricopeptide repeat protein 28 OS=Homo sapiens OX=9606 GN=TTC28 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF12770CHATCHAT domainDomainInterproscan
PF13176TPR_7Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR029309FamilyCalcium-responsive transcription factorInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan
IPR024983DomainCHAT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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