Detailed information of alvinactis_v1_g12676 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_6:10100234...10193790
NR annotation: XP_020911065.2, uncharacterized protein LOC110248849, partial [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q80SY5Pre-mRNA-splicing factor 38B OS=Mus musculus OX=10090 GN=Prpf38b PE=1 SV=1
Q6AXY7Pre-mRNA-splicing factor 38B OS=Rattus norvegicus OX=10116 GN=Prpf38b PE=1 SV=1
Q5VTL8Pre-mRNA-splicing factor 38B OS=Homo sapiens OX=9606 GN=PRPF38B PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00566RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan
PF03371PRP38PRP38 familyFamilyInterproscan
PF19056WD40_2WD40 repeated domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR000195DomainRab-GAP-TBC domainInterproscan
IPR005037FamilyPre-mRNA-splicing factor 38Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23142UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP